Cellulophaga baltica 18: M666_00890
Help
Entry
M666_00890 CDS
T03565
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cbat
Cellulophaga baltica 18
Pathway
cbat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M666_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbat03021
]
M666_00890
03400 DNA repair and recombination proteins [BR:
cbat03400
]
M666_00890
Enzymes [BR:
cbat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M666_00890
Transcription machinery [BR:
cbat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M666_00890
DNA repair and recombination proteins [BR:
cbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M666_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Fungal_KA1
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AIZ40257
UniProt:
A0AAU8R6Z5
LinkDB
All DBs
Position
complement(238926..239918)
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSIRVD
KVEHEFSVISGIVEDVTEIILNLKQVRFKRQIEDVDSETVSVSVSGKNQLTAGDFQKFIS
GFQVLNPDLVICNMDAKVNFNMELVIEKGRGYVPAEENKKSGAPIGTIAIDSIFTPIKNV
KYSIENFRVEQKTDYEKLVFEIESDGSIAPKDALTEGAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttaattttcaaaaacccgataaagttataatgattgattcgacagatttc
gaagggaagtttgaattccgccctttggaacctggttatggattgactgttggaaatgct
ttaagaagagtattactatcttctttagaaggttttgcaattacctctattcgcgtagat
aaagtagagcatgaattctctgttatatctggtatcgtagaagatgtaactgaaattatt
ctaaaccttaagcaagttcgttttaaaagacaaattgaagatgtagattctgaaactgtt
tctgtttcggtaagtggtaaaaaccaacttacagcaggggattttcaaaaatttatttct
ggatttcaagtacttaatcctgatctagtaatctgtaatatggatgctaaagttaacttc
aatatggagttagttattgaaaagggtagaggttatgttcctgctgaggaaaataagaag
tctggtgctccaattggtacgatagctattgattctatctttacacctattaagaatgta
aaatatagcattgaaaactttcgtgtagaacaaaagaccgattacgaaaaattagttttc
gaaattgaatctgatggttctatcgctccaaaggatgctttaacagaaggtgctaaggtt
ttaatacaccactttatgttattctctgatgagcgtatcactttagaagctgacgaaatt
gcacaaactgaaacttatgacgaagagtccctacacatgcgtcagttattaaaaacaaaa
ttagtagatatggatctttcggttcgtgctctaaattgtttgaaagctgcggaagtagat
actctaggagacttagtttcttttaataaaaatgatttaatgaagtttagaaacttcggt
aaaaagtcattaacagagcttgaagaacttgtaatcaataaaggtttaagtttcggtatg
gatctgtcaaaatataaattagataaagattaa
DBGET
integrated database retrieval system
