Cellulophaga baltica 18: M666_07505
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Entry
M666_07505 CDS
T03565
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cbat
Cellulophaga baltica 18
Pathway
cbat02020
Two-component system
cbat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cbat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M666_07505
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M666_07505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbat03021
]
M666_07505
Transcription machinery [BR:
cbat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M666_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
SurA_N_3
CEP76_N
RelE
HTH_12
LacI
Motif
Other DBs
NCBI-ProteinID:
AIZ41430
UniProt:
A0AAU8RV94
LinkDB
All DBs
Position
complement(1760853..1762310)
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQHLSFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALETGKEELDNFEDEF
EDEFNDEIDSESINTEDINIDEYLSDDEIPEYRTQANNYSADDEERTVPYAAGTSFNQYL
LNQLNTIYLSDDEWAIAEFLVGSVDESGYIRRPINDILDDLAFTQNVYTEAETIKKVLKT
VQELDPPGVGATSLEECLIIQLKRKEITASIELAIAILEKSFDQFTKKHYQKLIQKHNIT
EEELRQAISEIERLNPKPGGSYSGNTRMIEHIVPDFSIKIVDGELELTLNGRNAPELHVS
RGYNNMLEGYKNSKEKSKSQKDTVLFIKQKLDAAKWFIDAIKQRQQTLFITMNTIMQYQE
EYFLTGDERNLRPMILKDIADTIQMDVSTVSRVANSKYVDTPYGTRLIKDYFSESMKNDQ
GEDVSTKEIKKILENVITEEEKRKPLTDDKLADILKEKGYPIARRTVAKYREQLGIPVAR
MRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacaacatttatcttttaaattatcgcagaagctttctcctcagcaaattcag
ttaatgaaactgattcaattgcctacacaagcatttgaacagcgtttaaaacaagaatta
gaggaaaatccggctttagaaaccggcaaggaagagttggataattttgaggatgaattt
gaagatgagtttaatgatgaaatagacagcgaaagtattaataccgaagacattaatatt
gatgagtacctgagtgatgatgagattccggaatacagaacacaagctaataattatagt
gccgatgacgaagaacgtacggtaccttatgccgcaggaacttcttttaaccagtactta
ttaaatcaattaaatactatttaccttagtgatgatgaatgggccattgcagaattttta
gtaggtagcgtagatgaaagtgggtatatccgtagacccataaacgacattttagatgat
ttagctttcacgcaaaacgtatatacggaagcagagaccataaaaaaagttttaaaaact
gtacaagagctagaccctcctggggttggagcaacttcgctagaagagtgcttaatcata
caattaaagcgtaaagaaataaccgcgagtattgagctggcgattgctattctggaaaaa
tctttcgatcaatttactaagaaacactatcaaaagttaattcaaaaacacaatatcacg
gaagaggagttaaggcaagctatttctgaaatagaacgattaaacccaaaaccgggaggt
tcttattctggaaacacccgaatgatagaacatattgtgcccgatttttctattaaaatt
gttgatggtgaactagaactaactttaaatggcagaaatgcacctgagctacacgtatct
agagggtacaataatatgcttgaagggtacaaaaactctaaagaaaaatctaaatcacag
aaagataccgtcttatttattaagcaaaagttagatgccgcaaaatggtttatagatgcg
attaaacagcgccaacaaaccctattcattacaatgaatacgattatgcaataccaagaa
gaatattttttgacgggtgatgagcgtaatttaagacctatgattcttaaagatattgca
gataccatccaaatggatgtttctacagtttctagagttgccaatagtaaatatgtagac
acaccctacggcacacgtttgataaaagactatttctctgaatccatgaaaaatgaccaa
ggagaagatgtttctaccaaagagatcaaaaaaattcttgagaatgtaattaccgaagag
gaaaagagaaaacctcttaccgatgataagttagcagacattttaaaagagaaaggctac
cctattgcacgtagaaccgtagcaaaatacagagaacaattaggaattcccgtagctaga
atgcgaaaagaaatctaa
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