Cellulophaga baltica 18: M666_13385
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Entry
M666_13385 CDS
T03565
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbat
Cellulophaga baltica 18
Pathway
cbat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M666_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbat03019
]
M666_13385
03400 DNA repair and recombination proteins [BR:
cbat03400
]
M666_13385
Enzymes [BR:
cbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M666_13385
Messenger RNA biogenesis [BR:
cbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M666_13385
DNA repair and recombination proteins [BR:
cbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M666_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF2620
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AIZ42478
UniProt:
A0AAU8RJ91
LinkDB
All DBs
Position
complement(3134092..3135993)
Genome browser
AA seq
633 aa
AA seq
DB search
MQLEPKDILKKYWGFSDFKESQEEIIAAILQQKDVLALLPTGGGKSLCFQVPALATDGIC
IVVSPLIALIKDQVDNLKKKGVKALALTGGISQNEVVDLLDNCLYGNYKFLYLSPERLQQ
DLIKDRIQEMNVNLIAIDEAHCISQWGNDFRPSYLNCSVLRDLAPDAPIIALTATATPVV
AKDIVTNLRLDEPLIKKTSFARDNIAFNVRWDDDKHYQLKQLLQDSKHSGIVYVRTRKLT
QELTHYLSSQNISATFYHGGLSKEVKGDRLKLWLDDKVRVMVATNAFGMGIDKADVSTIV
HYQIPDSVENYFQEAGRAGRNGAPATATVLTNKSDEIQVKRQFLSGLPTVPYLKTLYNKL
NNYFQISFGESSTETYQLNFNAFCATYSLNPFLTYNALRILDQNSVIALSESFSKKTSIR
FIATKNHIFDYIDTYGKIAPILQVILRTYGGIFEYDTKINTFAIAKKSSVSEKEVVKVLE
QLKKDEIITYTAQHNDIEVLFLVPREDERTINLFAKKVELLTAQKTKNIEAVLQYLKNDT
VCRSQQLLAYFGEKKEACGRCDVCLKTPPIAVEIIALAKEAILMQLQQKPQTSREIIKTV
LYKEEAIFSAIKALLEDEIIDITEKNEYKIAKA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctagagcctaaagacattttaaaaaaatattggggattttctgattttaaagaa
tctcaagaagaaattatagctgctattttacagcagaaagatgtcctcgctttgttacct
acaggcggaggaaaatcgctttgctttcaagttcctgcgctggctactgatggaatttgc
attgtcgtttcccctttaatcgccttaattaaagaccaagtagacaatctaaaaaagaaa
ggtgtaaaggcattagcgctaacgggtggtatctctcaaaatgaagtagtagatttatta
gacaattgcctttatgggaattataaatttctatacctatctcccgaaaggttgcaacaa
gatcttataaaagaccgcattcaggaaatgaatgtaaatctaattgccatagatgaagct
cactgtatttctcaatggggaaatgattttagaccttcttatcttaactgtagtgtacta
agagatctagcgcctgatgctcctatcattgctttaacagccactgcaacccctgtagtc
gctaaagatattgtcactaatttaaggcttgatgaacccttaattaagaaaacttccttt
gctagagataatattgcttttaatgtacgttgggatgatgacaagcactaccaattaaag
caacttttgcaagacagtaaacacagtggtattgtttatgtacgtaccagaaaactaacc
caagaattaacgcattacttaagttctcaaaacataagtgctaccttttatcatggcgga
ctctctaaagaggtaaaaggagaccgtttaaagttatggctagacgataaagtgcgggtc
atggtagctaccaacgcctttggcatgggaatagacaaagcagatgtgagtactattgta
cattatcaaatacctgatagtgtagaaaactattttcaagaagcgggtagagctggtaga
aatggtgctcctgctacagctactgtactcaccaacaaatctgatgaaatacaggtaaaa
cgacagtttttgagtggtttacccacggtaccgtatttaaaaacgctctacaataagctc
aataattactttcaaatttcttttggagaaagtagtacagaaacgtatcaattaaatttt
aatgccttctgcgccacttattctttaaacccttttctaacgtataacgcactgcgtatt
ttagatcagaattctgtgattgctttatcagaatcattttcaaaaaaaaccagtatacga
tttatcgctacaaaaaatcatatttttgattacattgatacctatggcaaaatagcgccg
atactacaggttattttaagaacctatggcggaatttttgagtacgacactaaaataaat
acttttgccattgccaaaaaatcgagcgttagcgaaaaagaggttgttaaggtattagaa
cagttaaagaaagatgaaattattacctataccgctcagcacaatgatatagaagtgtta
tttcttgttcctagagaagatgaaagaaccattaatctctttgctaaaaaagtagaactc
cttaccgcccagaaaacaaaaaatatagaagccgttcttcaatatttaaagaatgatacg
gtgtgtagaagtcagcaattactggcctactttggagagaaaaaagaggcttgtggacgt
tgcgatgtgtgcttaaaaactccgcctattgctgtagaaattatagcattagccaaagag
gccattttaatgcaattacagcagaagccacaaacttctagagaaattataaagaccgtc
ctttataaagaagaggctatttttagtgctataaaggcacttttagaagatgaaataata
gatattaccgaaaaaaacgaatacaaaatagcaaaagcatga
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