Cellulophaga baltica 18: M666_17990
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Entry
M666_17990 CDS
T03565
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbat
Cellulophaga baltica 18
Pathway
cbat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M666_17990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbat03019
]
M666_17990
03009 Ribosome biogenesis [BR:
cbat03009
]
M666_17990
Enzymes [BR:
cbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M666_17990
Messenger RNA biogenesis [BR:
cbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M666_17990
Ribosome biogenesis [BR:
cbat03009
]
Prokaryotic type
rRNA helicases
M666_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIZ43274
UniProt:
A0AAU8S1S5
LinkDB
All DBs
Position
4162947..4164860
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AA seq
637 aa
AA seq
DB search
MTKFEALGLKKSILDAITDMGFENPSDVQEKAIPILLGDDTDLVALAQTGTGKTAAFGFP
LIQKINADSRTTQGLILSPTRELCLQITNEMQAYSKYEKNINVVAIYGGASITDQARQIK
RGAQIIVATPGRMKDMMSRGLVDISKIDYCVLDEADEMLNMGFFEDIKEILSDTPKEKST
WLFSATMPREVATIAKKFMRSPQEITVGTKNSGASTVQHEYYVVSGRDRYPALKRLADTN
PDIFSVIFCRTKRDTQKVAESLIEDGYNAGALHGDLSQNQRDLVMSSFRKKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITRSELRKIKAIENK
IGQKFITKNIPSGMEICEIQLYHLANKIKDTEVNEEVESYLPAINDVFKDIDREELIKKV
VSVEFTRFFNYYNKTRDLNSGNSDRGDREERGSNTGSGEIPTSGSVRYFINVGEKDEYDW
MSLKDFLRDTLEVGQDDIFKVDVKESFSFFNTDAAITPKILETFKDFKVDGRFVNVEISS
NPGGGGGRGGRDRNRSGGGGGSRGGRDRNRGGGGGGGDFKKRRSSSSRDGGYGGGSSEGG
GSRRRSSDSGSSSRSSSRSGSRESSSGSKSKRRSGFF
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttgaagcgttaggccttaaaaagtctattttagacgctattacagacatg
ggttttgaaaacccatctgacgtacaagaaaaagcaattccaattttactaggtgatgat
acagacttagtagcccttgcccaaacaggtacaggaaaaacagcagcatttgggttccca
ttaattcaaaaaataaatgcagatagcagaaccactcaaggtttaatactatcaccaaca
cgtgagctttgtttgcaaattacaaacgaaatgcaagcgtattctaaatacgaaaaaaat
attaatgtagttgctatctatggtggtgctagcattacagaccaagcaagacaaattaag
cgtggtgcacaaattatcgtagcgactcctggtcgtatgaaagatatgatgagccgtgga
ttagtagatatctctaaaattgattattgtgttttagatgaagctgatgaaatgcttaac
atgggattctttgaagatattaaagaaattctttctgatactcctaaagaaaaaagcaca
tggttattctctgctacaatgccaagagaagtagctacaatcgctaagaagtttatgcgt
agtccacaagaaattactgtgggaacaaaaaactcaggagcatcaacagtacaacatgag
tattatgtagtaagtggtcgtgatagataccctgccttaaaaagattagcagatactaat
cctgatattttctctgtaatcttctgtagaactaagagagatacacaaaaagtagcagaa
agtcttattgaagatggttacaatgctggtgcattacatggagatttaagtcaaaaccaa
agagatttggtcatgagctctttccgtaaaaaacaaatacaaatgttagttgcaacagat
gttgcggcacgtggtattgatgttgatgacattacacacgtaattaattatcaattgcca
gatgaaatagaaacctatacgcaccgtagtggtagaacaggtagagctggtaaatctggt
atctctatggtaattattaccagaagtgagcttagaaaaataaaagcaatcgagaataaa
attggacaaaaattcatcacaaaaaatattccttctggaatggaaatttgtgagatccaa
ttatatcacttagcaaacaaaataaaagatactgaagtaaacgaagaggttgaatcatat
ttacctgctatcaacgatgtctttaaagatatcgatagagaagaacttatcaagaaagta
gtttctgtagagttcacacgtttctttaactactacaacaaaaccagagatttaaattct
ggaaactctgaccgaggagatagagaagaaagaggtagcaatactggtagtggtgaaata
cctactagtggttctgttcgttactttatcaatgttggagaaaaagacgaatatgactgg
atgtcacttaaagacttcttaagagatactctagaagtaggtcaagatgatatattcaaa
gtagacgttaaagagagtttttctttctttaataccgatgcagcgattactcctaaaatt
ttagagacttttaaagactttaaggtagatggtagatttgtaaacgttgagatttctagc
aacccaggtggtggcggaggtcgcggcggaagagatcgtaaccgtagtggcggtggtggc
ggtagccgcggaggaagagatcgtaaccgcggtggcggtggcggcggaggcgacttcaaa
aaacgtagatcttcatcttctagagatggtggctacggagggggttcttctgaaggcgga
ggatctagaagaagatcatctgactctggttctagctcaagatctagctcccgtagtgga
agtagagaatctagtagcggcagcaaaagcaaacgcagaagcggctttttctag
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