Marnyiella aurantia: H1R16_00095
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Entry
H1R16_00095 CDS
T08940
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cbau
Marnyiella aurantia
Pathway
cbau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H1R16_00095 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbau03400
]
H1R16_00095 (uvrA)
DNA repair and recombination proteins [BR:
cbau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H1R16_00095 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H1R16_00095 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_15
nSTAND3
AAA_21
AAA_25
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QMS98453
UniProt:
A0A7D7LTM1
LinkDB
All DBs
Position
20143..22974
Genome browser
AA seq
943 aa
AA seq
DB search
MSEKKEYIEIYGAREHNLKDIDVRIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVS
DAYSLTSGRKLVSYTEEQILESIKENYQGEKILLMAPVVRSRKGHYHELFVQMARKGYSQ
ARIDGVLQDLEYDLKLDRYKTHDIDIVIDRWIIGENATEGRMEKSLRTALDMGEGVIGIQ
KLGDSDIQYFSKNLMDDDSGQSLALPEPNTFSFNSPKGSCPNCKGLGLINKINTDYFVDN
PKLSIGQGALLPLEDIKNNKWVLAQLRNILEISNLSLTTPFKDIPAEVVDYMYFGMSREI
SKDLKYAGISKKIKVNFEGLVSFIEDIINDKESYDAVLLERHFTTEETCPKCNGTRLQPE
SLSFKIDGSHIAEISALSLAEFKEWLAQVRPKFSKKNALIANEILKEIETRLQFLLDMGL
DYLSLSRSSRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLIKSLKNLR
DIGNSVLVVEHDKDMILGADHVLDIGPRAGKFGGEVLWQGHPDDLLKADTVTADYMTGKR
QIAIPAERRAGNGKSIVLKGATGNNLKNVTLEIPLGKLVVVTGISGSGKSSLINGTLYPI
LNRHFYRSVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFSEL
PESKIRGYKPGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLEMTIDEAVDFFAPIPKIFSRVKTLQDVGLGYITLGQQSTTVSGGEAQRI
KLATELAKRQTGNTLYILDEPTTGLHFEDVKVLMDAINRLVDLGNSFIIIEHNMDVIKLA
DHMIDIGPEGGKHGGKIVAKGTPDEVSRNSKSLTGKFLRKELN
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagaaagaatatatagaaatttacggggcccgtgaacataacctaaaggat
attgatgttcgcatcccgcgtaatgaactggtggtaatcaccggtttatcgggcagtggg
aaatcttccctggcatttgataccatttttgccgaaggccagcgccgctacattgagacg
ttttcggcctatgccaggcagtttttgggtggtctggaacgtccggatgttgataagatt
gaaggactgtcacctgtaatcgctatcgaacagaaaacaacgaataaaaatccgcgttca
acggttggtaccgtaactgaactttatgatttcctcagacttcttttcgccagggtttca
gatgcttattccctgacttccggacggaaactggtaagttataccgaagaacagatcctg
gaatcaataaaggaaaattatcagggcgaaaaaatactcctgatggcgccggtggtacgg
tcacgtaaaggtcactatcacgaactcttcgtacagatggcccgtaaaggctacagtcag
gcacggatagacggtgttttgcaggatctggaatatgatctgaagctggacaggtacaag
acccatgatattgacatcgttatagaccgttggatcattggtgaaaatgctaccgagggg
cgcatggaaaaatcacttcgtaccgcactggatatgggtgaaggcgttatcggcatccaa
aaacttggcgacagcgacatccagtatttttcaaaaaacctgatggacgacgactccgga
cagtcactggctttgccggaacccaacacattttctttcaactcaccaaaaggaagctgc
ccgaactgcaaaggacttggcctcatcaacaaaattaacactgattattttgttgataat
cctaagctttcgatcggtcagggcgctctattaccgttggaagatatcaaaaacaataaa
tgggtacttgcccagcttagaaatattctagaaatctctaatctttcgctaaccacacct
ttcaaagatatccccgccgaggtggtggactatatgtactttgggatgtcgcgcgaaata
agcaaggatcttaagtatgccggcatctctaagaagataaaagtgaattttgaaggactg
gtgtctttcattgaagatattataaatgataaggaaagctatgatgcggtacttctggaa
agacattttacgaccgaagaaacctgtcctaaatgtaacggcacacggctgcagcctgaa
agtctgagttttaaaatagacggcagccatattgctgaaatcagcgccttatcgctggca
gagttcaaagaatggctggcgcaggtaagaccgaaattctcaaagaagaatgcgcttata
gcaaatgagatcctgaaagagatcgaaacccgtttgcagttccttttggacatgggactt
gactatttaagtttaagccgcagttcgcggacgctttccggtggtgaaagtcagcgtatc
cgtttggctactcaaatcggctcgcagttggtcaatgtactttacattctggacgaacct
tccatcggacttcaccaaagagataacgaaagacttattaaatcgcttaaaaaccttcgg
gatattggaaactccgttctcgtagtggagcatgacaaagacatgattctcggggcagac
catgtgctggacatcggaccacgtgccggaaaatttggtggcgaagtgttgtggcagggg
catccggacgatttactgaaagccgatacagttaccgccgattatatgaccggcaaaaga
cagatcgcaattcctgccgaaaggcgggccggaaacggaaaaagcattgtgttgaaagga
gctaccggaaataaccttaaaaatgtaaccctggaaattccgctgggtaaactggtggtg
gtgacaggtatttccggcagtggtaaatcttcactcatcaacggtacgctttatccgatc
ctgaaccgtcatttctaccgcagcgtacaggaaccgttaccttataaaaaaattgaaggc
attgaacatatcgataagattgttgatgtagaccaaactccaatcggacggacaccaagg
tccaatcctgcaacatatacaggtatgtttacggatatcaggaatcttttctctgaactt
cctgaaagtaagattcgcggttacaaacccggaagattctcattcaacgtaaaaggtggg
cgttgcgaaacctgtcagggtggaggccttaaagtgattgagatgaattttcttcccgat
gtttacgtgcactgtgaaacctgtaatggtaaaagattcaaccgcgagactcttgaagtc
cgctataaaggcaagtccatttccgatgttttggagatgacaattgatgaagcggtggat
ttctttgcaccaattcctaaaatattcagccgggtaaaaacacttcaggatgtcggtttg
ggctatatcaccttggggcagcagtccactaccgtttcgggtggcgaggcacaacgcatt
aaactagctaccgaacttgcaaaacgccagaccggaaacaccctttacattttggatgaa
cctaccacaggacttcattttgaagatgtaaaagtgctgatggatgccataaacagactg
gtggaccttggtaactccttcattattatcgaacataatatggacgttataaaacttgca
gatcatatgattgatattggtcctgaaggtgggaaacatggagggaagattgtggcaaag
ggtacaccggatgaagtgagcaggaactccaaatccctcaccggaaaattcctgcgaaag
gaacttaattga
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