Marnyiella aurantia: H1R16_03610
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Entry
H1R16_03610 CDS
T08940
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbau
Marnyiella aurantia
Pathway
cbau03030
DNA replication
cbau03430
Mismatch repair
cbau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1R16_03610 (dnaE)
03430 Mismatch repair
H1R16_03610 (dnaE)
03440 Homologous recombination
H1R16_03610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbau03032
]
H1R16_03610 (dnaE)
03400 DNA repair and recombination proteins [BR:
cbau03400
]
H1R16_03610 (dnaE)
Enzymes [BR:
cbau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1R16_03610 (dnaE)
DNA replication proteins [BR:
cbau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H1R16_03610 (dnaE)
DNA repair and recombination proteins [BR:
cbau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H1R16_03610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QMS99104
UniProt:
A0A7D7LN89
LinkDB
All DBs
Position
complement(801101..805738)
Genome browser
AA seq
1545 aa
AA seq
DB search
MFLIFDTETTGLPQNFNAPISDSQNWPRMVQIAWQLHDRNGNLIENQDYIIKPEGYDIPF
NATRIHGISTKMAHELGRNLGEVLLEFQQVLERAEVVAGHNIDFDYKIAGAEFFRLDIQN
NLQEKPAADTMELGTPFCQLGGGKNGRYKSPKLEELYEKLYGNRFDEAHNAAADVNATAQ
VFFEMIRIGIVPAQLLRITDHELQEFITGHPEPFAPFPIVIRRQVAAFKKKKTVDFGESD
EIELGEYFNFHNHSIYSSLQASTNISDLVSKALQNDFPAVGLVDLGNMMGAFKFVSEVEK
ANDTIRKNYEEYIKRKEKAEAEDQEFSMIEPRRKPLLAVIGCEFYISDRPEQKQFTKDDP
DRRTHVVLLAKNFDGYRNLAKLSSLGYVNGFYFGVPRISKAMISEYKDNLIALTAGAAGD
VPNTILEFGETKGEEAFRWWKETFGDDFYVQIQNHQVDEEEHLNEVLLQFADKYEVKILA
QNETFYTEKEDAHIQDILYCIKDGEKLSSPVGRGFGKRRGLPSREFYIKDPDELRQAFNQ
FPDAFAAYSELLEKFSPYTLKRDVLLPEFDIPEEFLREDDLLDGGKRGENAYLRHLTYEG
AAKRYEVITDEIRERLDFELEVIAKTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAAGSA
VAYCTGITNVDPIAYDLLFERFLNPERISMPDIDIDFDDEGRDRIIKWVVDKYGKTNVAQ
IITYSVLGGKSAIKDAGRVLDLSIPETNNIAKLVPSTPGMNIAKAFAKFEKLGDEDRILA
QEMKDILANPEDSRYEVLAAAQKMEGCIRNTGIHACGVIITPEDISNLVPITIASKDADI
LVSQFDNSVAENAGLLKMDFLGLRTLTIIKHAIKLISERHGIDINPDEIPLDDARTYQLF
KEGRTVGIFQYESPGMQKYMRELKPTKFADLIAMNALYRPGPIKYIPNFINRKHGTEEIV
YDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKDRATLDKMYPKF
LEGGEKNNLDVDRLNKIWKDWEAFAEYAFNKSHSTCYALIAYQTAYLKANYPAEYMSSVM
TNNLNNTKQITMFMEDCKNMGVDVLGPDVNESQYEFSVNDKGQIRFGLGAIKGIGEGPSE
AIVITRKEQAYSDIYDFFQRIPSSQINKRVAESLVMAGAFDEVDKYHRAQYFDIDNNGKT
NLERLLRYGQSFQDSRNEIENSLFADFAEEVRIEPPKINPAPEWPNMYLLNKEKEIIGFY
LSAHPLDEFKYQYRFIQGALGRNSILGGRPEDGLQTLDPVIIPVEMGDEEGDEVVDLIID
DGDEIVEEEQKNVEAKGNFNFLNLDEIDAFRDKVFGPDQIRLFEEIQDYREKQKFNNNSK
EYMVAGLITEYTVRDGRNSGEKIAFITLEDYSGSYSFRLGDRDYLRLRDKIDVQRFLIFK
IKFTISRDGRVFVNVTEVSELKEAFEQFAKSMTVVLDVNHLRRDDLEFLKETLSGLNGNQ
KLGFYVKNPEDQSHLEVLSLQTHVNISGDLIEVFNEMQRHEVFLN
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaatattcgatactgaaacaaccggtttaccacaaaatttcaatgctccgatt
tccgattcgcagaactggcccagaatggttcagattgcgtggcagctacacgaccgtaat
ggtaatttaattgaaaatcaggattatatcatcaagccggaaggttatgatatacccttt
aatgcgaccagaatccatggtatctccacaaaaatggctcatgaacttgggcgtaatctg
ggtgaagtattactggaatttcaacaggtgctggagagggctgaggtagtagcaggacac
aatatagatttcgactacaagattgccggtgcagaatttttccggctagatattcagaac
aatctgcaggaaaaacctgcggcagacacgatggagcttggtactccgttttgtcagttg
ggcggcggcaaaaacggccggtataaatccccaaaactggaggagctgtacgagaaactt
tatggtaatcggtttgatgaggcacacaatgccgctgccgacgtaaatgcaacagcgcag
gtcttctttgagatgatccgtatcgggattgtacccgcacagcttctgcgaataaccgac
cacgaactccaggaatttattaccggtcatcccgaaccttttgcaccgttccccatcgtg
atcaggcgtcaggttgctgcctttaagaagaagaaaacggtcgattttggcgagtctgac
gaaatcgaactgggcgaatactttaacttccataaccacagtatatattcctcgcttcag
gcttcaaccaatatttcagatttggtcagcaaagccttacagaatgattttccggctgta
ggtcttgttgatctggggaatatgatgggtgcttttaaatttgtttctgaagtggaaaaa
gcaaatgataccatcaggaaaaattatgaggaatatattaaacggaaagagaaggcagaa
gcggaagaccaggagttttcgatgattgagccccgccgtaagcctctccttgcggtaatc
ggatgtgaattttatatatcagaccggccggagcaaaagcagtttaccaaagacgatcca
gaccgaagaacacatgtagtattgctggcaaaaaattttgacggttaccgtaacctcgca
aagttatccagccttggatatgtgaacggtttttatttcggtgtaccgcgtatttccaaa
gccatgatctctgagtataaggataatcttattgccctcacagctggggctgcaggagat
gtgcctaataccatacttgaatttggggaaacaaaaggggaggaggcattccggtggtgg
aaggaaacctttggcgatgacttttatgtgcaaattcagaaccaccaggtggacgaagag
gagcacttgaacgaggttctcctgcagttcgcagataaatatgaggtgaagattctggca
cagaatgaaacgttttacactgaaaaggaagatgctcatatccaggatatcctgtattgt
atcaaagacggtgaaaagctaagttctcctgtgggccgtggtttcggcaaaagacgcggt
ctgccgtcaagggaattctacattaaggatcctgatgaattaagacaggcattcaatcag
tttcccgatgcatttgctgcttattcagaactgttagaaaaattttcgccatatacatta
aaacgtgatgtacttctgcctgaatttgatattccagaggaatttttgcgtgaagatgac
cttctggacggcggaaagcgcggtgaaaatgcctatttgcgacaccttacgtatgagggt
gccgctaaaagatatgaagtaataacggatgagatacgcgaacgtcttgattttgagctg
gaagtaattgcaaagacaggttacccaggttactttctgattgttcaggatttctgtaac
gaggcgcgtaaaatgggcgtttgggtaggcccggggcgtggctcggcggccggatcggct
gttgcttattgcaccggtatcaccaatgtggatcccatcgcctatgatctgctttttgag
cgtttcctaaatcctgaaaggatttcgatgcctgatattgatatcgatttcgatgacgaa
ggacgtgacagaattataaaatgggttgtagacaaatatggcaaaaccaatgttgcgcaa
attattacctattcggtattaggaggtaaatccgctatcaaggacgccgggcgggtgctg
gatctgtctattcctgaaaccaataatatagccaagttagtcccgtccacaccgggtatg
aatatagccaaagcttttgccaagttcgaaaagctgggggatgaagaccggattctggct
caggaaatgaaggacattctggccaacccggaagacagccgttatgaggtgcttgctgca
gcacagaaaatggaagggtgcatccgcaacaccggaattcatgcctgtggtgtaatcatc
acacctgaagatatttccaatctcgtaccgattaccattgcctccaaagatgcggacatc
ctggtgtcacagtttgataactcggttgctgaaaatgcggggctgctgaagatggacttc
ctggggctcaggacgctcacgatcatcaaacatgccattaagcttatcagtgaaagacat
ggaattgatatcaatccggatgaaattccacttgatgatgcccgtacgtaccaactcttc
aaggaaggccgaactgttgggatatttcagtatgaaagcccgggaatgcagaagtatatg
cgtgagctcaagcctaccaagtttgccgatcttattgcaatgaatgccctgtacaggccg
ggtcctattaagtacattccaaacttcattaaccgtaagcatgggacagaggaaatcgta
tacgaccttcctgaaacagaggaatatctgaaggaaacctatggtattacggtatatcag
gagcaggtaatgctgctgtcgcagaaactggccaattttacaaaaggtgaggctgatact
ttacggaaagctatgggtaaaaaggaccgtgctactttggataaaatgtatccaaaattc
ctggaaggcggcgaaaaaaacaacctggatgtagacagactcaacaaaatctggaaggac
tgggaggcatttgcagaatatgcgtttaacaagtcccactctacatgctacgcgcttatt
gcctatcagacagcatatttaaaggcaaattatccagctgaatatatgtccagtgtgatg
acgaataacctgaataataccaagcagatcaccatgtttatggaagactgtaaaaatatg
ggggttgatgttttggggccggatgtaaatgaatcacaatacgagttttcggttaatgac
aaaggacagatcaggttcggcctgggtgctataaaaggcataggcgagggcccaagtgag
gcaatagttattacccgcaaagaacaggcgtacagcgatatatatgattttttccagcgg
ataccttcatcccaaatcaacaagcgggtggcggaaagtttggtaatggcgggagccttt
gatgaggtggataaatatcacagagcgcagtattttgacatcgataataatggaaaaaca
aatcttgaaagacttcttcgctatggccaaagtttccaggacagccgtaacgaaattgaa
aattcactgtttgctgatttcgcagaagaagtcaggattgagccgccaaaaatcaatccc
gcgccagaatggccaaatatgtacctgctgaacaaagagaaggaaattattggtttttat
ctttctgcacatccattggacgagtttaaatatcagtaccgttttatacagggtgcactg
ggacgaaacagtattttgggtggtcggcctgaagacggattgcaaacacttgatcctgta
attattcctgtagaaatgggtgatgaagaaggtgatgaggttgtagatctgattatagat
gacggcgatgaaattgtggaagaagagcagaaaaatgtggaggcaaaagggaatttcaac
ttcctgaatcttgatgaaattgatgcttttcgggataaggtttttggtccggaccagatc
cgtctttttgaggaaatccaggattacagggaaaagcagaaattcaacaataattcaaaa
gagtacatggtggcaggactcataacagaatataccgtccgggacggacgtaacagcggg
gaaaagattgcatttataacgctggaagactattccggcagttactccttccggcttgga
gaccgcgattatctgcgtcttcgggataagattgatgtacagcgttttctgatttttaag
ataaaatttacgatttccagggatggacgcgtatttgtaaatgttacggaggtcagcgaa
ctgaaggaggcttttgagcaattcgctaaaagtatgacggtggtgcttgatgtaaatcat
cttcggcgcgatgatttggaatttcttaaagaaaccctgagcggcctcaatggaaaccaa
aagctgggcttctacgttaaaaatccagaggatcaaagtcatctggaggtcctgagcctg
cagacccatgtaaatatcagcggagacctcatcgaagtctttaatgaaatgcagcgacac
gaggtgtttttaaattaa
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