Marnyiella aurantia: H1R16_03780
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Entry
H1R16_03780 CDS
T08940
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbau
Marnyiella aurantia
Pathway
cbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1R16_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbau03019
]
H1R16_03780
03016 Transfer RNA biogenesis [BR:
cbau03016
]
H1R16_03780
Enzymes [BR:
cbau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H1R16_03780
Messenger RNA biogenesis [BR:
cbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H1R16_03780
Transfer RNA biogenesis [BR:
cbau03016
]
Prokaryotic type
tRNA degradation factors
H1R16_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
QMS99137
UniProt:
A0A7D7LT24
LinkDB
All DBs
Position
complement(843564..845906)
Genome browser
AA seq
780 aa
AA seq
DB search
MNAPQAIIEKIQLKDGREITIETGKLAKQANGSVVVRMGGTMLLATVVANKDASPGVDFL
PLTVDYREKFYSGGKIPGNFFRREARPSDEEILTMRLVDRVLRPLFPDDFHAEVQVMISL
ISYDKECMPEALAGLAASAAIAITDIPFNGPMSEVTVARIDGQLVVNPSRENLDKADLNI
LVGATKDSIVMVEGVMDEITEEEMIEAIKFAHEEIKVQVEAQERLAERVGKSLPKREYTH
ENHDEEIREKVWKDTFDKVYEVAKTPSAKEERHDNFKAVLEEFLAQYSEEELETVKPFAK
IYFHDVEKEAMRQMILNEKIRLDGRTPETIRPIWSEVDYLPGAHGSAVFTRGETQSLTAV
TLGSVKDANMVDSVAINYDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALSRI
IPAENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQITKPVSGIAMGLVTDPESGK
FTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIQGLSMDIMETALKQAREGRLHIL
GEMLKTLDAPRVDVKPHAPKMEVLEIPKEFIGGVIGPGGKIIQQMQKDFQTVIAIEEIGE
IGRIEISGVSRENINATIAAINEITFVPTVGEVYNGRVVKVMDFGAFVAIAKGTEGLLHI
SEIEWARLDKVPYNEGDMVEVKFMGYDDRKKMKLSRKVLLERPPRTERKEGEGDNRENRD
SRPPRNDRRDGGDRRRDDNFNRSNNRPEHSGRQTEKPAGEDTFKPLNESENTDDVKPEGF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccacaagcaattattgaaaaaattcaattaaaggatggtagagagatcacc
atcgagacagggaaactggccaagcaggccaacggatctgtagtagtaagaatgggcgga
acgatgcttctggcaaccgttgtagccaacaaagatgcaagcccgggcgtggattttctt
ccactgacggtagattacagagagaaattctattcaggaggtaaaatccccggaaacttt
ttccgtagagaagccagaccatctgacgaggaaattttaacgatgagactggtagaccgc
gttttgcgtccgcttttcccggacgatttccacgctgaagttcaggtgatgatttccctg
atttcttatgataaagaatgtatgcctgaagcactggctggtttagccgcttctgctgcc
atcgcaatcacggatatcccgttcaacggaccgatgtctgaagtaacggtagccagaatt
gacggacagttagttgtaaatccaagcagggagaatctggataaagcagaccttaacatc
cttgtaggtgctaccaaagactctatcgtaatggtagaaggtgtgatggacgagattacc
gaagaggaaatgatcgaagccattaaattcgcacacgaagaaattaaagttcaggttgaa
gcgcaggaaagacttgctgaaagagtaggcaaatctttaccgaaaagagaatacacccac
gaaaaccacgacgaagaaattcgtgaaaaggtttggaaagatactttcgacaaagtttac
gaagtagccaagacaccttctgcaaaagaagaaagacacgataacttcaaggctgttctg
gaggagttcttagctcagtattcagaagaagaactggaaacagttaagccgttcgccaag
atctatttccacgatgtggagaaagaggcaatgcgtcaaatgatcctgaacgagaaaatc
cgtctggatggccgtacgccggaaactatccgtccgatctggtcagaagtggattacctg
ccgggagctcacggatctgcagtattcaccagaggtgaaactcagtctttaacagctgta
actttaggttcagtgaaagatgccaatatggtagattcagtggccatcaattacgacgag
aaatttttccttcactataacttcccaccattctcaacaggtgaggcaagacctttaaga
ggtacatcaagaagggaagtaggacacggaaaccttgcacagcgtgcgctttccagaatt
attccggcagaaaacccatatacgatccgtattgtttccgatatccttgaatctaacggt
tcatcttcaatggcaacggtttgcgccggaacattggctctgatggatgcgggtgtacag
atcacgaaaccggtttcaggtattgctatgggattggtaactgatcctgaatcaggtaaa
ttcactgtactttctgatatcttaggagacgaagatcacttaggtgatatggattttaaa
gtaaccggaacggcagacggaatcacggcttgccagatggatatcaagatccagggactt
tctatggacatcatggaaacggcattgaaacaagcgagagaaggccgtcttcatatcctt
ggcgaaatgttgaagaccttggatgcaccaagagttgacgttaaaccgcacgctccgaaa
atggaagtactcgagattcctaaagaattcatcggtggcgttatcggacctggcggaaaa
ataattcagcagatgcagaaagatttccagaccgttattgcgatcgaagaaatcggtgag
atcggtagaattgaaatctccggcgtaagcagagagaatatcaacgcgaccatcgcagcc
attaacgaaattactttcgtgccgactgtaggcgaagtttacaacggtagagtagtgaaa
gtaatggatttcggtgcgttcgtagcaattgcgaaaggcactgaaggtttgcttcacatc
tccgaaatcgagtgggcaagacttgacaaagttccttacaacgagggcgatatggtggaa
gtgaaattcatgggttatgatgaccgtaagaaaatgaagctttcaagaaaagtacttctc
gaaagacctccaagaactgaacgtaaggaaggtgaaggcgataaccgcgaaaaccgcgac
agccgtccgccaagaaacgaccgcagagacggtggcgacagaagaagagacgacaacttc
aaccgcagcaataacagacccgagcacagtggccgccagactgaaaaaccagcaggagaa
gacaccttcaagccgctgaacgaaagtgaaaatacagacgatgtgaagccggaaggtttt
taa
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