Marnyiella aurantia: H1R16_05665
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Entry
H1R16_05665 CDS
T08940
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbau
Marnyiella aurantia
Pathway
cbau03030
DNA replication
cbau03430
Mismatch repair
cbau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1R16_05665
03430 Mismatch repair
H1R16_05665
03440 Homologous recombination
H1R16_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbau03032
]
H1R16_05665
03400 DNA repair and recombination proteins [BR:
cbau03400
]
H1R16_05665
Enzymes [BR:
cbau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1R16_05665
DNA replication proteins [BR:
cbau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H1R16_05665
DNA repair and recombination proteins [BR:
cbau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H1R16_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QMS99485
UniProt:
A0A7D7QLZ3
LinkDB
All DBs
Position
complement(1238017..1241070)
Genome browser
AA seq
1017 aa
AA seq
DB search
MYLNCHTYHSLRYGTLSIEELVQQAQELQVSTLALTDINTVTGIYDFYKLCLDKGIKPVV
GVEVRNEDELYYITLAKSQSGIAEINRLLTAHNCENSPLPGSNPDFREVYVVYPLENVPE
KLLEHEFIGIRPEQLNLVFNSLWKRLIHKMVALAPVTVRTQRDHNLHRILRAVDHNTLIS
KLTEADFCKPDEVLKPVSEIRDAYRNYPQILANTEKILEDCHFSFDFSTPKNKKHFTATQ
AEDEELLRTLAYEGLKKRYPENHTAARLRIEKELKVINQLDFCGYFLITWDIVQYSNKMG
FMHVGRGSGANSIVSYCLGITDICPIELDLYFERFLNLNRNSPPDFDIDWSWQNRDAILQ
YIFDKYGRDHVAFCGTNVEFKYRSIFREIGKVFGLPKDELDVLTTKPMAEHEENSVVRLV
HKYGKLLEKFPNQRSMHSCGILISEEPITNFTALEMPPKGFPIVQFDMHVAEDIGFEKFD
ILSQRGLGSIKDTVDLIRQNRGISVDIKDTALSKDEAAANEFLSRGKTIGCFYIESPAMR
GLLRRLKCGDYKTLVAASSIIRPGVAQSGMMREYIFRHNNPTQFEYFHEVFKEQLGETYG
IMVYQEDVIKIALYYGGLSAADGDILRRAMSGKGRSLAALQKLKDDFFISCSKLGHPEQL
SKEVYRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPVEFMVSVINNQGGFYRTEVYV
HEARMSGGIIHNPCVNKSLFKTTVYGKDIYLGLMHIEKIEGRIARHIPEQREKAGEYKSL
EDFIKRIPVGIETLQILIFIGAFRFTGKQKNELLIEARLIMSTYKPECRMESLLEEPPKK
YSLPELERNTFEDAFDEIEILGFPVTCSPFDLLQTRFRGRIMANDLLKYHKKQVKMLAYL
ISRKHVPTKRGTMFFGTWIDAEGEYFDTAHFPDNLQKYPFQGGGCYLLLGQVEVDFHFPT
ITVLKMAKMPFIPDPRYALDKEKAYEVHRKINEDVSMTWRQPYPQESEIGLPRNKMV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttaactgccatacttaccacagcctgcgctacggaacactctccatagaggaa
ctggttcagcaggcccaggaactccaggtttccactttggccctcacggatatcaatacg
gttacggggatatatgatttttataaactttgcctggataaagggataaaaccggtagtc
ggggtggaggtaaggaatgaagatgaactttattatattaccctggcaaagtcccaaagc
ggtattgccgaaataaaccgtttgctaacggctcataactgcgaaaacagtccgctgccc
ggatccaatccggatttcagagaggtgtatgtagtgtatccgctggagaatgtgccggag
aaacttctggaacatgaatttataggaatccgtccggaacagcttaatttggtcttcaat
tctctgtggaaaagactcatccataaaatggtagccctggcaccggttacggtacgcacg
cagcgcgaccataatcttcaccgcattctgagggctgtagaccataatactttaataagc
aaactgactgaggcggatttctgtaaacccgatgaggtgcttaaaccggtgtcagaaatt
cgcgacgcttaccgaaactacccgcaaatcctggcaaataccgaaaagatactggaagac
tgccacttcagtttcgacttttccacgcccaaaaacaaaaagcattttacagcgactcag
gcggaagatgaggagttgctgcgtaccctggcttatgaagggctgaagaaaagatatccc
gaaaatcataccgccgcgcgtctgcggatagaaaaggagttgaaggtcattaaccagctc
gatttctgcggatattttctcatcacctgggatattgtgcagtacagtaacaagatgggt
ttcatgcatgtggggcggggcagcggggccaacagtatcgtgagttactgcctgggtatt
acggatatatgtcccattgaactggatctttattttgaaaggttcctgaacctgaacagg
aacagtccgcccgatttcgatatagactggagctggcagaaccgggatgccatccttcag
tatatatttgataaatacggcagggaccatgtggctttctgcggaaccaatgttgaattt
aaataccgctccatcttccgcgaaatagggaaagtatttggacttcccaaagacgaactg
gatgtgctgaccactaaacctatggccgaacatgaagagaattccgtggtcaggctggtg
cacaaatacggcaaactgctggagaaattccccaaccagcgcagcatgcattcctgcggt
atcctgatctccgaggaacctatcacgaacttcacggctttggagatgccacccaaaggt
ttccccattgttcagtttgacatgcatgtggccgaagatatcggctttgaaaagtttgat
atcctttcgcagcgcggtttgggaagcattaaagataccgtagaccttatccggcaaaac
cgaggcatttccgtggatattaaggatacagcgctatccaaagacgaagccgctgccaat
gaatttctgagccgcggaaagaccatcggatgtttttatattgaaagccccgccatgcgc
ggacttttgcggcgactgaagtgtggcgattataaaacgctggtcgccgcatcgtccatt
atccggcccggcgtggcacaaagtggcatgatgcgcgaatacattttccggcacaataat
cccacccagttcgaatattttcatgaggtatttaaagaacagctgggcgaaacctacgga
atcatggtctaccaggaagatgtgattaagattgcactctattacggtggtctttcggcg
gcagacggcgatatcctgaggcgcgctatgagtggcaagggccggtcattagccgcactg
cagaagctaaaggatgatttcttcatctcctgcagtaaactgggccatcctgaacagctt
tcaaaagaggtttaccgccagatcgaatcctttgccggttattccttttgtaaagcgcat
tcggcttcctacgcggtggagagttaccagagtctctaccttaaggtatattatccggtg
gaatttatggtgagcgtaatcaataatcagggaggcttttacaggacggaggtgtatgta
cacgaagcacgcatgtcaggcggaatcatccacaatccctgcgtaaataagagcctgttt
aaaactacggtatatggcaaggatatatatctgggactgatgcatattgagaaaatagaa
ggccggattgccaggcatatcccggagcagcgggaaaaggccggtgagtataaatcactg
gaagatttcatcaaaaggatcccggtgggcattgaaacccttcagatccttatatttata
ggtgccttccggtttacaggcaaacagaaaaatgaactccttatagaagcgcgcttaatc
atgtctacttataaacccgaatgccgcatggagtctttactggaagagccgccaaagaaa
tacagtttgccggagctggaaaggaatacgtttgaagatgcttttgatgaaatcgaaata
ctgggtttccctgtcacctgcagcccgttcgatttgcttcagaccaggttccgggggagg
attatggcaaatgacctgctgaagtaccacaaaaaacaggtaaagatgctggcctacctc
atctcccgaaagcatgttcccaccaaaaggggtactatgtttttcggtacctggattgat
gcggagggcgaatattttgatacggcccattttccggataacctgcagaaatatcccttc
cagggcggtggctgctatctgcttttgggacaggtggaggtggatttccattttcccacc
ataactgttttgaaaatggccaaaatgccttttattcccgacccaaggtatgctttggat
aaagagaaagcgtatgaagtacaccggaagatcaatgaggatgtaagtatgacctggcgc
cagccttacccgcaggaaagtgaaataggcctgcccagaaataaaatggtataa
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