Marnyiella aurantia: H1R16_06600
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Entry
H1R16_06600 CDS
T08940
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbau
Marnyiella aurantia
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbau03032
]
H1R16_06600 (topA)
03400 DNA repair and recombination proteins [BR:
cbau03400
]
H1R16_06600 (topA)
Enzymes [BR:
cbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H1R16_06600 (topA)
DNA replication proteins [BR:
cbau03032
]
Prokaryotic type
DNA Topoisomerases
H1R16_06600 (topA)
DNA repair and recombination proteins [BR:
cbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H1R16_06600 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QMS97408
UniProt:
A0A7D7QR24
LinkDB
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Position
complement(1448025..1450598)
Genome browser
AA seq
857 aa
AA seq
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MPKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLSTFTPDYEVSADKK
KIVAELKDAVKKAETVWLASDEDREGEAIAWHLAQELKLKEDNTKRIVFHEITKNAILKA
IENPRSIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKTGLSAGRVQSVAVRLVVERELE
IRNFVPKSSFRVEGAFVNSEKQVIAAKVKKDFAEEKEAEKFLNLAKDTDFTVLNVEKKPG
TRTASAPFTTSTLQQEASNRLGYGVTSTMRVAQRLYEEGFITYMRTDSVSLSQEAINGAK
AQILSEYGEEYSNPRNYTTKSASAQEAHEAIRPTDFSVKSVGDAQLNKLYQLIYKRTLAS
QMANAKIEKTVIEIGSPKITPHFEAQGEVIVFDGFLKVYGITKTDEDEEENNEKILPKVT
VGEALTYKKIEATEKFTKPAARYTEAGLVKKLEELGIGRPSTYAPTIQTIQNRAYVDKRE
IEPQEREIVKMTLAKSGVTKEVLTEKFGGDKNKFVPTDIGEVVNDFLTQNFAEILDYGFT
AKVEQDFDDIANGSERWKEVLQGFYSDFHPRIEDVEENADRANGERILGVDPKSGKNVMA
RIGRFGPMVQIGEQDDEEKPIFASLMASQNIATITLEDALELFRLPFDLQEFEGNPVSVG
VGRFGPYVKWGETFISIPRGEDPLSVSQERAEEIIREKQIADAPVATYKGEGVTKGTGRF
GPFIKYKSIFINVPKRYDFDNLTQEEMHELIEAKLEKEANRYIRQWEDEKISIENGRWGP
FIKFGKTMFKIPKTKKDEKYTAEELADVSLDEVKKWITAQDKDAFKEKPKKAAAKKTAAK
KPAAKKAPAKKPAAKKK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatttagtgattgtggaatcacctgcaaaagcaaagaccattcagaagtac
cttgggaaggattttgaggtgaaatccagcttcggtcatatccgcgacctgcctaaaaag
gggatggggatagaccttagtacttttactcccgattacgaagtttcggcagataaaaaa
aagatagtcgctgaacttaaagacgcggtgaagaaggcggaaacggtatggctagcctcc
gatgaggaccgcgagggtgaggctattgcctggcaccttgcgcaggagctgaaactgaaa
gaagataacacgaaacgtattgtttttcacgaaattacaaagaatgctatcctaaaggct
attgagaatccgcggtctattgaccagaatctggtaaatgcccaacaggctcggcgagtc
ctggatcggatcgtaggttttgagatgtcaccggtactttggaaaaaagtgaagaccgga
ctttcggccggccgtgtgcagtctgtagccgttcggttggtagtagaaagagaacttgag
atcaggaattttgtcccaaaatccagtttccgggtagaaggtgctttcgtaaacagtgag
aagcaggtcattgcagctaaggtgaaaaaagattttgcagaagaaaaggaagccgaaaag
tttctgaaccttgcaaaagatactgactttactgtgcttaatgttgaaaagaaaccggga
acacgtactgcatcggcaccttttacaacatccacattacagcaggaagcaagtaaccgt
ctgggttatggcgtgacctctacaatgagagttgcacagcgcctttacgaagaaggtttt
atcacttatatgcgtaccgactccgtaagtctttcgcaggaagccattaacggggccaaa
gcgcagatcctttcagaatacggtgaagaatattccaatccgcgtaattatactacaaag
tcagcatcagcacaggaagctcacgaagctatacgtccgacagacttttccgtaaagtcg
gttggcgacgcgcagcttaacaaattataccagttaatctataaaagaactctcgccagc
caaatggcaaatgccaaaatagagaaaacagttattgaaattgggagccctaaaattact
ccgcattttgaagcacagggcgaggtgattgtatttgacggtttcctgaaggtatacgga
attaccaaaaccgatgaggatgaggaggaaaacaacgaaaaaattctcccgaaagtgact
gttggcgaagctttaacgtataaaaagattgaagccaccgaaaagtttacgaaacctgcc
gcacgttacaccgaagctgggttggtgaaaaagctggaagagcttggcataggcaggcca
tccacttatgcaccaacgatccagaccattcagaaccgtgcgtatgtggacaaacgggaa
attgagcctcaagaaagagagattgtgaaaatgactcttgccaaatccggtgttacgaag
gaagttcttacagagaaatttggcggcgacaaaaacaaattcgtccctacagatattggt
gaagtggttaatgatttcctgacgcagaactttgccgagatccttgactatggttttacc
gcaaaggtggagcaggattttgatgatattgccaacggttccgaaaggtggaaagaagtg
cttcagggtttttacagtgatttccacccacggattgaggatgttgaggaaaatgcagac
cgtgcgaatggcgaacgtatacttggggtggatcctaaaagcggaaagaatgtaatggcc
agaatcggcaggtttggaccaatggtgcagatcggagagcaggatgatgaggaaaaaccg
attttcgccagtctcatggcctctcaaaatattgcaacaattacacttgaagatgctttg
gaactcttcagactgccttttgacctgcaggaatttgagggaaaccctgtttcagtcgga
gtaggccgttttggtccatacgtaaaatggggtgagacattcataagtataccgcgtggc
gaagacccactttccgtatcacaggaacgcgccgaggaaatcatccgcgaaaaacaaatt
gctgatgcacctgtggcaacttataaaggcgagggcgtcactaaaggaaccggaagattc
ggaccttttatcaaatataaatcaattttcatcaatgttccgaagcgatatgatttcgat
aatctgactcaggaggaaatgcatgaactcatagaagcaaaactggagaaagaagccaac
agatatatacgccagtgggaagacgagaaaatttcgattgaaaacggtagatggggacct
ttcatcaaattcggaaaaacaatgtttaagattccgaagacgaaaaaagatgaaaaatat
accgctgaggaacttgctgacgtttctttggatgaggtgaaaaagtggatcaccgctcag
gataaggatgccttcaaggaaaaacctaaaaaggccgcggcgaagaaaactgcggcgaag
aaaccggccgcaaagaaggcgccagctaaaaagccggctgcaaaaaagaaataa
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