Marnyiella aurantia: H1R16_09905
Help
Entry
H1R16_09905 CDS
T08940
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbau
Marnyiella aurantia
Pathway
cbau03030
DNA replication
cbau03410
Base excision repair
cbau03420
Nucleotide excision repair
cbau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1R16_09905 (polA)
03410 Base excision repair
H1R16_09905 (polA)
03420 Nucleotide excision repair
H1R16_09905 (polA)
03440 Homologous recombination
H1R16_09905 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbau03032
]
H1R16_09905 (polA)
03400 DNA repair and recombination proteins [BR:
cbau03400
]
H1R16_09905 (polA)
Enzymes [BR:
cbau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1R16_09905 (polA)
DNA replication proteins [BR:
cbau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H1R16_09905 (polA)
DNA repair and recombination proteins [BR:
cbau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H1R16_09905 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H1R16_09905 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DUF2202
HHH_2
HHH_5
Fn3-like
Motif
Other DBs
NCBI-ProteinID:
QMS98018
UniProt:
A0A7D7LRB7
LinkDB
All DBs
Position
2129624..2132470
Genome browser
AA seq
948 aa
AA seq
DB search
MSHNNDKRLFLIDAYAMIFRGYYALIRSPRMTSDGKDTSAIFGFTNSLIELIRRERPSHL
AVVFDVGVASVRTVDFAEYKANRSETPEAIKIAIPYIHSILEAMHVPNLGVEGYEADDVI
GTIACKAEKEGYTTYMVTPDKDFAQLVTDKIKIYKPGIKGAEFEILGVEEVKAKYEIEDP
KQVIDFLAMMGDSVDNIPGLDGVGEKTAKKFLKEYGNIENLLANTDQIKGKLREKVEASA
ERGILSKKLATIICDAPIEFHQEQYDLEIPDFEQVKTVFDELEFRRLYENLYRAFAPSST
DSSDVKNLAGFEQVNVNNGDESRTATTMQLDLFANYEELDRATETKTTIESNDHLYQFAD
TAEAQRLLVKNLMKQRAVSFDTELNSLNEMEADIVGISFCYRKGLAYYVPLSENREEALQ
TLEIFRPFFEKDDVIKIAHNLKVDFKILQQYGIQVRGAMFDTMIAHYLLNPDGRHGLDYL
SEVFLQYKPVAIETLIGKKGKKQGTLRDLSVEEQTAYVAEDADITWQLYELFAPQLKKED
LEDLFYKVEMPLMEVLAKMELEGVSLDKAWLEQESRDLENDLRALEKTIFELSGEEFNMN
SPRQLGEILFDKLQLDPKAKKTKTGQYATSEDILQKLSSKHEIIQHILEYRTYQKLKSTY
VDALPLQIDKDDNRVHTTFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVAGEGKK
IISADYSQIELRLIAEISNEENMIQAFQDGEDIHASTASKLFNIPLEEVSKTQRSQAKTV
NFGIIYGQGAFALAEQTGLSRSEAKQMIEAYFETYPRLKKYMGEQVVKAQELGYVETVLK
RKRHLKDINSANFVVKAHAERNAVNAPIQGSAADVIKLAMIKIDKKLTEQNLQTKMLLQV
HDELLFEAPIEEVEEVTQLIRAEMESALETKVPLLVEVGAGDNWLEAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaacaacgataaaagactttttctcattgatgcctacgccatgattttccgt
ggttattacgcacttatacgcagtccgcggatgacgagtgacggcaaggatacttccgcg
atatttggatttaccaactcgcttattgaactgatccgccgcgagagaccttcgcattta
gctgtggtttttgatgttggtgtggcaagtgtaagaactgtggattttgcggaatataag
gccaaccgcagcgagactccggaagccattaaaatcgctatcccctatattcacagcatt
ctggaagcgatgcacgtaccgaatttgggcgtggaaggttatgaggccgatgatgtcatc
ggaacaatagcctgcaaggcggaaaaagaaggttacacgacttatatggtgacacccgac
aaagattttgcccagctggttacagataagataaaaatttataaacccggcatcaaaggt
gctgaatttgaaatcctgggtgtagaggaggtgaaagccaaatatgaaatagaagaccca
aaacaggtcattgatttcctggcaatgatgggcgattccgtagataatatccccggactt
gacggcgtgggtgagaagaccgccaagaaattcctgaaggaatacggcaatattgaaaat
ctgctggccaatacggatcaaataaaaggaaagctacgcgaaaaagtggaagccagcgca
gagagaggaatcctttcaaaaaaactggctacaattatctgcgacgcacccattgagttt
catcaggagcaatacgatctggagatccccgattttgagcaggtgaaaacggtttttgat
gaacttgaattccgcaggctttacgaaaacctgtaccgggctttcgcaccctcgtctacc
gacagttcagatgtaaaaaatctcgccggttttgagcaggtaaatgtcaataacggtgat
gaatcccggactgccacaacaatgcagcttgatctttttgccaactatgaagaactggac
agggccacggaaaccaaaacaacaattgaaagcaatgatcatctctatcagtttgctgat
actgctgaagcccagcggctcttggtgaaaaatctcatgaagcagcgtgcggtgagtttc
gatactgaactcaattcacttaatgaaatggaggccgacatagttggcatcagtttctgc
taccggaaaggactggcttattacgtaccgctttccgaaaaccgcgaggaagctttgcaa
acgctggaaatattccgcccgttttttgagaaggatgatgttattaagatagcccataat
ctgaaggtagatttcaaaatcctccagcagtatggtattcaggtgaggggagccatgttc
gataccatgattgctcactacctgctcaatccggacggacgccacggactggactatctt
tcagaagtatttctgcagtacaaacctgtcgctatagagacactcattggcaagaaaggc
aaaaaacagggaacgcttcgtgacctgtcggtggaagaacagactgcttatgtggccgaa
gatgcagatattacctggcagctgtacgaactgtttgcgcctcagcttaaaaaggaagat
ctggaagatcttttctataaagttgaaatgccgttgatggaagttttggccaagatggaa
ctggaaggtgtttcactcgacaaagcatggctggaacaggaaagcagagatcttgaaaat
gatcttcgcgctctggaaaagactattttcgaactttcaggtgaagaattcaacatgaat
tcgccacgccagctcggtgaaatattatttgacaaacttcagctggatcctaaagccaaa
aagaccaaaacaggacaatacgccacgtccgaagatattctgcagaaactttcgtccaaa
catgaaatcatccagcatattttggaatacaggacctatcagaaacttaaatccacatac
gtagatgctttgccgctacagattgacaaagatgataaccgcgtgcacaccactttctcc
caaaccacagctgcaacagggcgtcttgcaagcgtgaaccctaaccttcagaatattccg
atccgtacgttacgcggacagcagatcagaggggcatttgtggccggtgaggggaagaaa
atcatttcagccgattactcgcagatcgaactcaggcttattgctgagatttccaacgag
gaaaatatgatccaggctttccaggacggtgaagatattcacgcatccacagcctcaaaa
ctgttcaatattcctttggaggaagtcagcaagacccagcgtagccaggccaagacggta
aacttcgggattatttacggtcagggtgcttttgcattggcagaacaaaccggtctttcc
agaagtgaagccaagcagatgatcgaagcttattttgaaacctatccaaggctgaagaaa
tatatgggcgaacaggtggtgaaggcgcaggaacttggttatgtggaaacagtgctgaaa
cgcaaaagacatctgaaggatattaattccgcaaatttcgtagtaaaagcgcatgcggag
agaaacgcggtgaacgcgccaatacagggcagcgctgctgatgttataaagctggcgatg
attaaaattgacaaaaaactgacagagcaaaatcttcagaccaaaatgcttcttcaggtt
catgatgaacttctttttgaagcaccgattgaggaggttgaagaagtgacacagctgatc
cgtgctgaaatggaatcggcacttgaaactaaggttccgctgctcgtggaagttggagcc
ggcgataactggctggaggcacattag
DBGET
integrated database retrieval system