Marnyiella aurantia: H1R16_11980
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Entry
H1R16_11980 CDS
T08940
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cbau
Marnyiella aurantia
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbau03032
]
H1R16_11980 (gyrB)
03400 DNA repair and recombination proteins [BR:
cbau03400
]
H1R16_11980 (gyrB)
Enzymes [BR:
cbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H1R16_11980 (gyrB)
DNA replication proteins [BR:
cbau03032
]
Prokaryotic type
DNA Topoisomerases
H1R16_11980 (gyrB)
DNA repair and recombination proteins [BR:
cbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H1R16_11980 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QMS98398
UniProt:
A0A7D7LRV8
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All DBs
Position
2578419..2580353
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AA seq
644 aa
AA seq
DB search
MSQKQYTASSIQALEGMEHVRMRPSMYIGDVGLRGLHHLVYEVVDNSIDEALAGHCDTIS
VTIHEGESISVKDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SVVNALSVSLIATVNRDGTVYQQKYSRGAALAPVKEIGTTTERGTEVFFEPDDTIFQEIV
FNYDTLATRLRELAFLNRGITITLTDERVKNEDGSLQHETFYSEGGLKEFVEFIDGNREA
IMDNVIFMEGERDDIPVEVAMRYNTSFNENLHSYVNNINTHEGGTHLTGFRRALTRTLKK
FADELGIPAKEKVEVTGDDFREGLTAIISVKVMEPQFEGQTKTKLGNSEVAGAVDKIVGE
MLTNFLEEHPNEAKLIVQKVVLAAKARQAAKKAREMVQRKSPMGGAGLPGKLADCSSKDP
AISEIYLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKSMIHKVYDNEEIKNIYTALG
VSVGTEEDSKALNLSKLRYHKVVIMTDADVDGSHISTLILTFFFRYMKELIEQGYVYIAS
PPLYLLKKGNKKIYAWNEKEREEYTLEIAPDGKGVDVQRYKGLGEMNAEQLWETTMNPEH
RTMKQVTIDNAGEADRIFSMLMGDEVPPRRDFIEKNAKYARIDV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaacaatatacagcgagcagtattcaggcccttgagggtatggaacacgtg
cggatgaggccatctatgtacatcggagatgtaggattaagaggtttgcatcatttggtt
tatgaagtggtggataattccattgatgaggcactggccggacactgtgatactatttcc
gttacgattcatgaaggtgagtcaatctccgtaaaggataacggccgtggtattccggta
gattttcacgagaaggagcagaaatcggctctggaagtggtaatgaccaagattggtgca
ggtggtaagtttgacaaggattcctacaaggtttccggtggattgcatggagtaggggtt
tctgtagtaaatgcactttccgtttctctgattgctactgtaaaccgcgacggcacagtt
tatcagcaaaaatattcacgcggcgccgcactggcccctgttaaagaaatagggaccaca
actgagagaggaactgaggttttcttcgaacctgatgatacgatttttcaggaaatcgtg
tttaattatgatacgctggcaacccgtttacgtgagctggcatttttgaaccgcggaatc
accattacacttacagacgaaagggtaaagaatgaggacgggtcgcttcagcatgaaaca
ttttactctgagggtggtcttaaggaatttgttgagttcatcgacggaaaccgtgaagcc
attatggataatgtgatctttatggaaggcgaaagggatgatattcctgtagaggttgca
atgcgttataacacgtcattcaacgaaaaccttcattcctatgtaaataatatcaatacc
catgagggtggtacgcaccttactggtttcagacgtgcacttacgagaacattgaagaaa
ttcgcagacgaactgggtattccggccaaggaaaaggtagaagttacgggtgacgatttc
cgtgagggacttacggcgattatctctgtaaaagtgatggaacctcagtttgaaggtcag
accaagaccaaactgggtaactctgaagttgctggtgcagtagataagattgtgggcgaa
atgcttactaacttcttggaggaacatcccaacgaggcaaaactgattgtgcagaaagtg
gtcctggccgctaaagccagacaggcagcaaagaaagcacgtgaaatggtgcagcgaaaa
tcaccgatgggtggtgccggacttccgggaaaactcgcagactgttcttccaaggaccct
gcgatttctgaaatttaccttgtagagggagattccgcaggtggaactgccaaacagggc
cgtgaccgacatttccaggcgatcctgccattgcgtggtaagatcctgaacgtagagaaa
tccatgatccataaggtttatgataatgaggaaatcaagaatatctatacggcactcggc
gtatcggtaggaactgaagaagacagtaaagcacttaatctttccaaactgagataccat
aaagtggtgatcatgacggatgctgatgtggacggttcgcatatctccacactgattctt
accttcttcttccgctatatgaaggaacttattgagcagggttatgtttatattgcatct
ccaccattatacctgctgaagaaaggtaataagaaaatttatgcctggaacgaaaaggag
cgtgaagagtatactctggaaatagctccggacggaaaaggcgttgatgtacagcgttat
aaaggtcttggtgagatgaatgctgagcagctttgggaaaccacaatgaatcccgagcac
cgtaccatgaaacaggtaactattgataatgccggcgaggcagaccgtattttctccatg
cttatgggcgacgaggtgccgccaagaagggattttattgaaaagaacgcgaagtatgcg
cggattgatgtttaa
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