KEGG   Marnyiella aurantia: H1R16_12085
Entry
H1R16_12085       CDS       T08940                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cbau  Marnyiella aurantia
Pathway
cbau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H1R16_12085 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbau03019]
    H1R16_12085 (rny)
Messenger RNA biogenesis [BR:cbau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H1R16_12085 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 DUF6286 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: QMS98419
UniProt: A0A7D7LMH0
LinkDB
Position
2598011..2599582
AA seq 523 aa
MTTTVIIVGILALVIGAVLGMVFSRSSLNTKAKFILEDAKKNAENIIETANVKAESVRKD
KESQAKVKFLELKSQHDGEIQSREKKMQDAEKRIRDKEQKLNDELSKTGKLEKDLDRQIA
DYSTKHEILEKKQQDLDAVIAQKVEILEKIANYSAEDAKAELVEAMKAEAKSRAQSHVQS
IMEEAQLNAKQEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTKKMIEE
EIIEVGKRTIMDLGIHGLHPELVKIVGRMKFRSSYGQNLLQHSREVANIAATMAAELGLN
VKMAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENAEVVNAIGAHHDEVEMTSLLS
PIIQVADAISGARPGARRQVLESYIQRLKDLEAAAMSFDGVSSAYAIQAGRELRVMVESN
KVNDDQSSQLSYDISEKIQNELTYPGQVRVTVIRETRSVNIAR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgacaacaactgttattatcgtaggcatcctcgcactggtcattggggccgtgcttggg
atggttttttcccgaagttcactaaataccaaggctaaattcattctggaagatgcaaaa
aagaatgccgaaaacattatagaaactgcaaatgtaaaggccgaatccgtacgcaaggac
aaagagtcccaggcgaaggtgaagtttctggaacttaaatctcagcatgatggcgagatt
cagagccgtgaaaagaaaatgcaggatgcagagaaaagaatccgcgacaaagagcagaaa
cttaatgacgaacttagcaagaccggtaaactggaaaaagacctggacagacagattgcg
gattattcaaccaagcatgaaattcttgaaaagaaacagcaggaccttgatgcggtaatc
gctcagaaagttgaaatcctggaaaaaattgcaaattacagtgccgaagacgcaaaagct
gaacttgtggaggcaatgaaagctgaagcaaagagccgcgcgcagtctcacgtgcaaagc
atcatggaagaagcgcagcttaatgccaagcaggaggccagaaaaattgttatccaaacg
atacagcgtataggtactgagcaggctatcgagaattctgtttctgttttcaatattgaa
tcagacgaaattaaaggccgtattatcggtagggaaggacgtaatatccgtgccctggaa
gctgcaacgggcgttgaaattattgtggacgatactccggaagctatcctgctttcctgt
ttcgatccggtaagacgtgaaatcgcaagactgtccctgcacagactggttacagacggc
agaatacaccctgctaggattgaagaggtggtggagaagaccaagaaaatgattgaagaa
gagatcattgaagttggaaaaagaaccataatggatttgggtattcatggacttcatcct
gaactggttaaaatcgtgggtcgcatgaagttcaggtcttcttacggacagaatcttctt
cagcactcacgtgaggtggccaacattgccgcgacgatggctgcggagcttggactgaat
gttaagatggctaaaagagctggattgcttcacgatatcggtaaggtgccggaacaggaa
tccgagctaccacacgcactgttaggcatgcagtgggccgagaagtatggcgaaaatgcc
gaggtggtgaatgccatcggtgcgcaccacgacgaggttgagatgacttcgcttctttca
ccgatcattcaggtggctgatgcgatttcaggagcaaggccgggcgccagacgtcaggtg
ctggaatcttacatccagcgtttaaaagaccttgaagcggcagcgatgagttttgacggg
gtttccagtgcctatgccatacaggccggacgtgaacttcgggttatggtagaaagtaac
aaggtgaatgacgaccagtcctcacagctgtcttacgatatctccgaaaagatccagaac
gagcttacctatccgggtcaggtacgtgtaacggttattcgcgagaccagatccgtgaat
attgcgagataa

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