Marnyiella aurantia: H1R16_12085
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Entry
H1R16_12085 CDS
T08940
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cbau
Marnyiella aurantia
Pathway
cbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1R16_12085 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbau03019
]
H1R16_12085 (rny)
Messenger RNA biogenesis [BR:
cbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H1R16_12085 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF6286
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QMS98419
UniProt:
A0A7D7LMH0
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Position
2598011..2599582
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AA seq
523 aa
AA seq
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MTTTVIIVGILALVIGAVLGMVFSRSSLNTKAKFILEDAKKNAENIIETANVKAESVRKD
KESQAKVKFLELKSQHDGEIQSREKKMQDAEKRIRDKEQKLNDELSKTGKLEKDLDRQIA
DYSTKHEILEKKQQDLDAVIAQKVEILEKIANYSAEDAKAELVEAMKAEAKSRAQSHVQS
IMEEAQLNAKQEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTKKMIEE
EIIEVGKRTIMDLGIHGLHPELVKIVGRMKFRSSYGQNLLQHSREVANIAATMAAELGLN
VKMAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENAEVVNAIGAHHDEVEMTSLLS
PIIQVADAISGARPGARRQVLESYIQRLKDLEAAAMSFDGVSSAYAIQAGRELRVMVESN
KVNDDQSSQLSYDISEKIQNELTYPGQVRVTVIRETRSVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactgttattatcgtaggcatcctcgcactggtcattggggccgtgcttggg
atggttttttcccgaagttcactaaataccaaggctaaattcattctggaagatgcaaaa
aagaatgccgaaaacattatagaaactgcaaatgtaaaggccgaatccgtacgcaaggac
aaagagtcccaggcgaaggtgaagtttctggaacttaaatctcagcatgatggcgagatt
cagagccgtgaaaagaaaatgcaggatgcagagaaaagaatccgcgacaaagagcagaaa
cttaatgacgaacttagcaagaccggtaaactggaaaaagacctggacagacagattgcg
gattattcaaccaagcatgaaattcttgaaaagaaacagcaggaccttgatgcggtaatc
gctcagaaagttgaaatcctggaaaaaattgcaaattacagtgccgaagacgcaaaagct
gaacttgtggaggcaatgaaagctgaagcaaagagccgcgcgcagtctcacgtgcaaagc
atcatggaagaagcgcagcttaatgccaagcaggaggccagaaaaattgttatccaaacg
atacagcgtataggtactgagcaggctatcgagaattctgtttctgttttcaatattgaa
tcagacgaaattaaaggccgtattatcggtagggaaggacgtaatatccgtgccctggaa
gctgcaacgggcgttgaaattattgtggacgatactccggaagctatcctgctttcctgt
ttcgatccggtaagacgtgaaatcgcaagactgtccctgcacagactggttacagacggc
agaatacaccctgctaggattgaagaggtggtggagaagaccaagaaaatgattgaagaa
gagatcattgaagttggaaaaagaaccataatggatttgggtattcatggacttcatcct
gaactggttaaaatcgtgggtcgcatgaagttcaggtcttcttacggacagaatcttctt
cagcactcacgtgaggtggccaacattgccgcgacgatggctgcggagcttggactgaat
gttaagatggctaaaagagctggattgcttcacgatatcggtaaggtgccggaacaggaa
tccgagctaccacacgcactgttaggcatgcagtgggccgagaagtatggcgaaaatgcc
gaggtggtgaatgccatcggtgcgcaccacgacgaggttgagatgacttcgcttctttca
ccgatcattcaggtggctgatgcgatttcaggagcaaggccgggcgccagacgtcaggtg
ctggaatcttacatccagcgtttaaaagaccttgaagcggcagcgatgagttttgacggg
gtttccagtgcctatgccatacaggccggacgtgaacttcgggttatggtagaaagtaac
aaggtgaatgacgaccagtcctcacagctgtcttacgatatctccgaaaagatccagaac
gagcttacctatccgggtcaggtacgtgtaacggttattcgcgagaccagatccgtgaat
attgcgagataa
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