Clostridium botulinum B1 Okra: CLD_0127
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Entry
CLD_0127 CDS
T00671
Name
(GenBank) MutS domain protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLD_0127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_0127
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CLD_0127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
Gemini_AC4_5
Motif
Other DBs
NCBI-ProteinID:
ACA44316
UniProt:
B1IDP5
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Position
753423..755318
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AA seq
631 aa
AA seq
DB search
MNKAALEKLHYYELKETIKEYCVSGLGKRLIDKLEPSSNIKIVNQRLDETSEGRRLLDVS
YNIPLEGIFNILPLIEKIEKGASLEPTDLTMMSNFLRGCRKVKLFIKDKEGYAPTLSAYG
ENICDLSYIEEEINRSIRGSVVDSNASKELKKIRRNIDICESRIKEKLDKFLRNSANKEY
IQEFFISQRDGKHTIAIKAAHKNKVQGTIVETSSKGTTVFMEPNVISKHTSELAVLKAEE
SVEEYKILATLTEMLFERIKDLKMNVDVISEYDMIWAKAKYSKVINGIKPKLNDYGYIKI
IKGKYPLIKDSIPLDFEIGKDYRGLIITGPNAGGKTIVLKTIGLLTLAIQSGFHIEAEEG
TEFSVFKKLFVDIGDNQSVENALSTFSSHVKNLAEIIRESTKSTLLLFDEIGSGTEPNEG
SALAIAILEELYHKGSITISTTHYGEIKNFSKEHPDFENAAMEFEKETLEPLYKLSIGKV
GDSNALYISKKMGLYDSIIDRARKYMDTKSYNYNLIEDSKIIKNKELQAEEDFYEYSVGD
KVILLENNESAIVYKERDRLNNVTILYNKEFIDVNYKRIKLELKASELYPEGYDLNQLFI
SYKERKLEKDIKRGSKKALKRIKKETLKRSK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagcattagaaaaattacattattatgaattaaaagaaacgataaaagaa
tattgcgtcagcggattaggaaaaagattaatagataaattagaacctagtagtaatata
aagattgtaaatcaaagactagatgaaacatctgagggaagaagattattagatgtctct
tataatataccattagagggtatttttaatatattaccccttattgaaaaaattgaaaaa
ggagcatctttagaaccgactgatttgactatgatgtcaaattttttaagaggatgtagg
aaagttaagttattcataaaagacaaagagggatatgcccctacattgagcgcttatgga
gagaatatttgtgatttgagttatattgaagaggaaataaatagatcaattagaggtagt
gtagttgactcaaatgctagtaaggaacttaaaaaaataagaagaaatattgacatatgt
gaaagtaggataaaggaaaaattagataagttccttagaaatagtgcaaataaagagtat
attcaagaattctttattagtcagcgtgatggaaaacatacgattgcaattaaggcagca
cataaaaataaagttcaaggaactatcgttgaaacgtcttcaaagggaacaacagtgttt
atggagccaaatgttatttcaaagcatacaagtgaattagcagtattaaaagcagaagaa
agtgtggaagaatacaaaatcctagctactttaacagagatgctttttgaaagaataaaa
gatttgaagatgaatgttgatgttatatctgaatatgatatgatttgggcaaaagctaaa
tatagtaaagtgataaatggaattaagcctaaactaaatgactatggatatataaaaata
attaaagggaaatatcctcttattaaagatagtatacctttagactttgaaattggaaaa
gattatagaggattaataataacaggaccaaacgcaggtggtaaaacaatagtattaaag
acaattgggttattaacattagcaatacaatctggattccatatagaagctgaggaagga
acagaattttcagtatttaaaaagttatttgttgatattggagataatcaaagtgttgaa
aatgcattaagtacattttcatctcatgtaaaaaatctagctgaaataattagagaaagt
acaaaatcaacattactattgtttgatgaaatcggtagtggaacagaaccaaatgaggga
tccgctttggctattgcaatattagaagaattgtatcacaagggctctataactatatca
actactcattatggagaaataaaaaacttttcaaaagaacatcctgattttgaaaatgca
gctatggaatttgagaaagaaactttagaaccattatataagcttagcataggaaaagta
ggagatagtaatgctttatatatttctaaaaagatgggattatatgattcaattattgat
agagcaagaaagtatatggatacaaaaagttataattataacttaatagaagacagcaag
attataaaaaataaagagttacaagcagaggaagatttttatgaatactctgtaggggat
aaagttattcttttagaaaataatgaatcagctattgtatataaagaaagagatagatta
aataatgtgactatactatataataaagaatttattgacgttaactataaaagaataaaa
ctagaattaaaggcaagtgaactttatccagaggggtatgacctaaatcagttatttata
agttataaggaaagaaagttagaaaaagatattaagaggggatctaaaaaagcattaaaa
agaataaaaaaagaaactttaaaacgttctaaataa
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