Clostridium botulinum B1 Okra: CLD_0306
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Entry
CLD_0306 CDS
T00671
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbb
Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_0306 (addA)
Enzymes [BR:
cbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLD_0306 (addA)
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLD_0306 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
Cullin_Nedd8
ResIII
AAA_30
Cystatin
Motif
Other DBs
NCBI-ProteinID:
ACA45232
UniProt:
B1IEN0
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All DBs
Position
551218..555057
Genome browser
AA seq
1279 aa
AA seq
DB search
MSGTKWTDEQRQAIFTKNCNLLVAAGAGAGKTAVLVQRIIEKILDKEEPIDIDKLLVVTF
TNAAAAEMRERIGDAISKGLDEDPESKVLRKQLTLLNKSNIMTIHSFCLQVIKNNFHTME
IDPNFRICDETEGILMKQEAIDELFDELYEIENEDFINLVESYASRKDTRLQEVVLELHR
FAKSAPFPYTWLLNMAEGFNVGENFNFEETLWADMIMEDMKVLLYGFKNMLQQSIDVILN
SEGIDYYYEPFKMDLSFINSLLEKSSFKEFRGEIIAYDFPKLPLKRNKDADKEAKERVKK
LRDKVKKKIVELKNILDSYENEFIKKEFIFLYPSMKALSNLVILFDKKYEAKKRERDLID
FNDIEHLCLSILTDKNSDGHIIPSDIALNYRKKFAEVLIDEYQDSNLVQEVIMSMVSRVK
GYWSFYNGQLIFNEKEINLEEPQIGLDIPNRFMVGDVKQSIYRFRQAKPEIFLDKYNEYN
EEEDRKNRKVKLFKNFRSREEVINGVNYLFKQIMSKTIGELDYTEEEALKVGASYGEEVK
GEPIELCLMDKKYEISEEVLKEYNVDEEEALDNIQLEGRLVAKKIQKLVGNNLEGGLKVF
DKKLGEYRNLQYRDIVILMRATSNWAPVFVEELAKEGIPVFADTNSGYFDTAEIKTMISL
LQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRMVNKNITFYECMEIIYRLYKNEKLDSY
YSFYIEDENKINKIIKDMNEKLKNKICSFIEKLKLWREKSIHIDIDEFIWFLYVETGYYG
YAGALQAGEQRQANLRILFQRAKQYAKTSYKGLFNFINFINKLKFSSGDMGSAKILGENE
NVVRIMSIHKSKGLEFPVVILSGTGKNFNMTDLNKNILFHRDLGYGPDYVDTERRIAYPS
LVKNIIKNKIRLETLSEEMRILYVALTRAREKLIITGLINNMDKTVEDWLNLSEDKNKVP
EYAVMSGKTYLDWIGPALIKHKDAVSFREELKMTSELSNIVDDKSKWKIELWNKRELLKE
KVEEDEVEISEKIKETLMSLEESNYKEEIYKRLSFKYKYDNASSIPTKLSVSDVKKQFIL
DEKENTEELFKKLELRKPMFMEEKKKISPSERGTIIHLFMQHLDLKKAENEEDIKEQINR
LIEREFITYEQSKVISPYKILKFCRGELGKRILNSNNVNKEMPFSIEIPALEIYKELDKE
IYKNEKLIIQGVIDCYFEEEDGLVLLDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGK
NVKDKYLYLFSVDNYIKID
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcactaaatggacagatgagcaaaggcaggctatttttactaagaattgcaac
ttgcttgtggcagcaggggctggggctggtaagactgctgttttggttcagagaataatt
gaaaaaatattggataaagaggaacctatagatatagataaattattggtagttactttt
actaatgcagctgcggcagaaatgagagagagaataggggatgctatttctaaaggctta
gatgaagacccagagtcaaaggtactaagaaaacagcttactttattaaataagtcaaat
ataatgactattcactccttttgtcttcaagttataaaaaataattttcatactatggaa
atagatcctaattttagaatatgtgatgaaacagaaggaatacttatgaaacaagaagct
atagatgagctttttgatgagttatatgaaatagagaatgaagattttattaatctagta
gaaagctatgccagtagaaaggatactagattacaagaagtggttttagagttacatagg
tttgctaaaagcgcaccattcccttatacttggcttctaaatatggcagagggatttaat
gtgggggaaaattttaattttgaagaaacactgtgggcagatatgattatggaggatatg
aaggtattattatatggatttaaaaatatgctacaacaatctatagatgtaatattaaat
tcagagggtatagactattattatgaaccctttaaaatggatttgagttttataaatagt
ttacttgaaaaatcaagttttaaagaatttagaggtgaaataatagcttatgattttcct
aaattacctttaaagagaaataaggatgcggataaagaggctaaggaaagggttaaaaaa
ttaagggataaggtaaagaaaaagatagtagagcttaaaaatatattagattcctatgaa
aatgaatttataaagaaggaatttatatttttatatccttcaatgaaagcactatccaat
ttagtaatactatttgataaaaaatatgaagccaaaaaaagagaacgagatttgattgat
tttaatgatatagagcatttatgtttatccatattaacagataagaatagtgatgggcat
ataattccatcagatattgctttaaattatagaaaaaaatttgcagaagtacttatagat
gaatatcaagatagtaatttggtacaagaagttattatgagtatggtatctagagtaaaa
ggatattggagtttttataatggacaattaatatttaatgaaaaagaaataaatttagaa
gaacctcagataggcttagatattcctaatcgatttatggtaggagatgtaaaacaaagc
atatatagatttagacaggcaaaacctgagatatttttagataaatataatgagtataat
gaagaagaagatagaaagaatagaaaagttaagctctttaagaactttagaagcagggaa
gaagtaattaatggtgtaaattatttatttaaacaaataatgtctaaaactataggggaa
ttagattatacagaggaagaggccttaaaggttggggctagctatggagaagaggtaaaa
ggtgaacctatagaattatgtttgatggataaaaagtatgaaataagtgaagaagtatta
aaagaatataatgtggatgaagaagaagctttagataatatacaattagagggaagatta
gtagctaaaaaaatacaaaaattagtgggaaataatttagaaggtggattaaaggtattt
gataaaaagttaggagagtacagaaaccttcaatatagagatatagtgattcttatgaga
gctacatctaactgggcaccagtatttgtagaggagcttgcaaaggaaggcataccagtt
tttgcagatacaaattcaggctattttgatacagcagaaataaaaactatgatatcttta
ttacaaataatagataatcctctgcaagacataccattgctttcagtattaagatcccct
atagcttcttttacagatgatgaacttattgacataagaatggtaaacaagaatataacc
ttttatgaatgtatggaaataatatatagattatataaaaatgaaaagttagattcctat
tatagtttttatattgaagatgaaaataagataaataaaataataaaagatatgaatgaa
aagttaaaaaataaaatatgtagttttatagaaaaattgaagctatggagagagaaatct
attcatatagatatagacgaatttatatggtttttatatgtagaaactggatattatggg
tatgcaggagcgcttcaagcaggagagcaaagacaggctaatttaaggatacttttccaa
agggcaaagcaatatgcaaaaactagttacaaaggattgtttaactttataaattttata
aataaattaaaattcagtagtggagatatgggcagtgcaaaaatacttggagaaaatgaa
aatgtagtaagaataatgagtattcataagagtaaaggactagaatttccagtagttata
ctaagtggaactggaaagaattttaatatgacagatcttaataaaaatatattatttcat
agagatctaggatatggtccagattatgtagatacagaaagaagaatagcttatccatcc
ttagttaaaaacattataaaaaataaaataagattagaaactctatcagaagaaatgcga
atattatatgtagctttaacaagggcaagagaaaaacttataataacaggattgataaat
aatatggataaaactgtagaggactggttgaatttatcagaggacaaaaataaagtacca
gaatatgctgttatgagtggaaaaacttatttagactggataggtccagctcttataaaa
cataaggatgctgtaagttttagagaagagttaaaaatgacatcagagctttctaatata
gtagatgataagtcaaaatggaaaatagaattatggaataaaagagaattattaaaggaa
aaggttgaagaggatgaagtggaaattagtgaaaaaataaaagaaacactgatgagttta
gaagaaagtaattataaagaagaaatatataaaagactttcctttaagtacaaatatgac
aatgcttcaagcataccaacaaaattgtcagtttcagatgtgaaaaaacaatttatatta
gatgagaaggaaaatacagaggagttatttaaaaaactagaacttagaaaacctatgttt
atggaagaaaaaaagaaaatatctccttcagagagaggtactattatacatttatttatg
caacatttagatttgaaaaaggcagaaaatgaagaggatataaaagaacaaataaatagg
ttaatagaaagagagttcataacctatgagcaatcaaaggtcataagtccatataaaata
ttaaaattttgtagaggtgaactaggcaaaagaatacttaattctaataatgtaaataaa
gaaatgcctttttctatagaaatacctgcattagaaatttataaagagttagataaagaa
atatataaaaatgaaaaattaataattcaaggggtaatagactgttattttgaggaagag
gatggattagtattattagattataaaacggattatgttaatgacatagaagaaataaag
aatagatatgaaatacagattaaatattatgaagaagccttaaatagaataacaggaaaa
aatgtaaaagataaatatttatatttattttctgtggacaattatataaaaattgattga
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