Clostridium botulinum B1 Okra: CLD_0507
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Entry
CLD_0507 CDS
T00671
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03030
DNA replication
cbb03430
Mismatch repair
cbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLD_0507
03430 Mismatch repair
CLD_0507
03440 Homologous recombination
CLD_0507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbb03032
]
CLD_0507
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_0507
Enzymes [BR:
cbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLD_0507
DNA replication proteins [BR:
cbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLD_0507
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLD_0507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACA44717
UniProt:
B1IE95
LinkDB
All DBs
Position
319470..320399
Genome browser
AA seq
309 aa
AA seq
DB search
MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMRFMPINIGIHGIRPHM
VKDELEFDKIWQKIKDYFNNNLVIAHNASFDMSVLRSTLKLYNIKMPSFEYICTMKLSKN
FYSNIDNARLNTINNFLGYKFKHHDALADAMACSNILLNISKELNSKNINEISKLIGVTL
GYVNENGYKPSSTKGRILKRSNRQAPRENKKIIESFNFTAFKEEIVVFTGGLASMTRNEA
MILVGKLNGTVGSSVTKKTTCLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLNEE
AFLQKCKEK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtagctatagattttgaaactgctaatgaaaaaagaaatagtccatgctct
ataggaattgtggttgtgaaggatggggaaattgtagaaaaagtacattatttaataaag
cccaaggaaatgagatttatgccaataaatattggaattcatggaataaggcctcatatg
gttaaggacgaattagagtttgataaaatttggcaaaaaattaaggactattttaataat
aatttagtaatagctcataatgcttcctttgatatgtctgtattaaggagtacattaaaa
ctttataatataaaaatgccaagttttgagtatatatgtacaatgaagctttctaaaaat
ttttatagtaacattgataatgcaagattaaatacaataaataattttttggggtacaag
tttaaacatcatgatgctctggcagatgcaatggcatgtagtaatattttacttaatata
tcaaaggaattaaattcaaagaatattaatgaaatatcaaaattaattggagtgacttta
ggatatgtaaatgaaaatggatataaaccatcttccactaaaggaaggattttaaaaaga
tctaatagacaagctccaagggaaaataaaaagataatagaaagctttaatttcactgca
tttaaagaagagattgttgtatttacaggtggattagcttctatgacaagaaatgaagca
atgatattagttggaaagcttaatggaactgttggaagctctgtaactaagaagacaaca
tgcttagttacaaatacaaaggacatagaggatttaaatagagaagaaatgagcaataag
cttaagaaagccatagatttaaagaaaaaaggtcaaaatataaagttcttaaatgaagaa
gcattcctacaaaaatgtaaagaaaaatag
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