Clostridium botulinum B1 Okra: CLD_0625
Help
Entry
CLD_0625 CDS
T00671
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cbb
Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbb01011
]
CLD_0625 (spoIID)
Enzymes [BR:
cbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CLD_0625 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CLD_0625 (spoIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
SLS1_C
Motif
Other DBs
NCBI-ProteinID:
ACA43690
UniProt:
B1IE38
LinkDB
All DBs
Position
195007..196083
Genome browser
AA seq
358 aa
AA seq
DB search
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKID
INKKYKVKSEPQVRVYFVNEKVVRSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWNKIEESVNSTKG
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSK
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGINMEILKYSD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagaagattaaataggtatactaatattaataagttagttataacaattataagtact
gtgtgtattatgttaattttaagctttgctttatcctttagtgaaaacaaagaacaaaaa
gttaaggaaactataagtaaggttaagttagatcagaaaagacaagaagaaaagattgat
ataaataaaaaatataaagtaaaatcagaaccacaagttagggtttactttgttaatgaa
aaagtagtgagatcaatacccttagaggaatatgtaaagggcgttgtttcagctgaaatg
ccagcggagtttcatatagaagcattgaaagctcaagcagtagcggctagaacttatgct
ttagctcatatgaaagggttcggtgaaaatcaatataataaaagaataaatgcagacgtg
tgtgatagtgttcaatctcaagtttttatgcctaaggataaaagaataaagtcttggcca
aaggaaaagagaaatgaatattggaacaaaatagaagaaagtgttaatagcactaagggg
aatgtacttgtatataacaatgaaatagttatggctccatattattttgctactagtaat
ggaaaaacagaagatagtgaaaatgtatttaatagtgaagttccttatttaaaaagtgta
aaaagtccaggagaagagaaggctcctaaatttaagagtagcaaaaaaatttcttatgat
caatttataaaaattataaaaactcaatatcctaagtgtactataaataaaaaagatata
aataaaaaaataataataaaggataaaacagaaagtggtagtattaaaaaaattaaaata
gataatatagaaattaaaggtacagaatttagaaaaatattaggtctaaattcatctaaa
ttttcattagaatttaaagataactatcttatagtaaattgtaatgggtatggtcataat
gttggaatgagtcaatggggggcaaatagtatgggtaaatcagggaaaaaatatgattat
atacttaaacattactataaaggaataaatatggaaattctcaaatatagtgattag
DBGET
integrated database retrieval system
