Clostridium botulinum B1 Okra: CLD_0786
Help
Entry
CLD_0786 CDS
T00671
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03030
DNA replication
cbb03430
Mismatch repair
cbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLD_0786 (dnaX)
03430 Mismatch repair
CLD_0786 (dnaX)
03440 Homologous recombination
CLD_0786 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbb03032
]
CLD_0786 (dnaX)
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_0786 (dnaX)
Enzymes [BR:
cbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLD_0786 (dnaX)
DNA replication proteins [BR:
cbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLD_0786 (dnaX)
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLD_0786 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
AAA_7
RuvB_N
AAA_assoc_2
DUF815
DnaX_C
DNA_pol3_delta_C
AAA_18
AAA_30
RCF1-5-like_lid
AAA_19
RNA_helicase
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ACA43569
UniProt:
B1IDW6
LinkDB
All DBs
Position
38186..39811
Genome browser
AA seq
541 aa
AA seq
DB search
MGYTALYREWRPRTFKEVVGQKHITVTLKNQVIEKRIAHAYLFCGTRGTGKTSTAKILSK
AVNCLNPKDGEPCNECEICNKINSGTLMDVIEMDAASKRKLEDIKEVIENVKYPPQEGKN
KVYIMDEVHMLTQEAVNAFLKTLEEPPSNVIFILATTDPQKLPITILSRCQRFDFRRIRN
EEIFERLRAIVSEQGIYADDKSLNLIARMSDGAMRDALSILDQVISTGDGKVEYDQVLDM
LGLVTNENLLRITNSIIEKDIEKSMRIIEDIVLSGKDIYNFIKDMITHLRNILMVKVSKN
PNEILDMSSENIDLVKEQSEKIRIEEIMRDIKILQEAEQQSKWVKQNRIYLELAVLKMCK
IEYDTSKEVILSRLNKIEELIKSGNIKLAINEEKKKIEPKEFNLKKEKESMEHSKIEKNS
LEDYNKDSKLTVETVKKMWHDILEAFKARRLMVLYAALVTANITDCKEGIITLNYNKQYS
FNKKRLEKPENNKVVQEIFSEVLKEKIRIIYIVEEKAKEENLPEEILKNTFGENILEIID
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
gtgggttataccgcattatatagagagtggagaccaagaacatttaaagaggtagttgga
caaaaacatataacagtaacacttaaaaatcaagttatagaaaaaagaatagctcatgct
tatcttttttgtggaacaagaggtacaggtaagacatctacagcaaaaatactatcaaaa
gcagtaaattgtttaaatcctaaggatggtgaaccttgtaacgaatgtgaaatttgtaat
aaaataaatagtggaactttaatggatgtaatagaaatggatgctgcttctaaaaggaaa
ttagaggacataaaggaagttatagaaaatgtaaaatatccaccacaggaagggaaaaat
aaggtttatataatggatgaggttcatatgttaactcaagaagcagtaaatgcttttttg
aaaactttagaagaacctccgagcaatgtaatattcatattagcaactacagatcctcaa
aaattacctataactatattatctagatgtcaacgatttgattttagaagaataagaaat
gaggaaatatttgaaaggcttagagcaatagtgtcagaacagggcatatatgcagatgat
aaaagtcttaatcttatagctagaatgtcagatggggctatgagagatgctcttagtata
ttagatcaagttatatctactggagatgggaaggtagagtatgatcaagtcttagatatg
ctaggattagttactaatgaaaatcttctaagaattacaaacagtataatagaaaaagat
atagagaaatctatgaggataatagaagatatagtgctaagtggaaaagacatatataat
tttataaaagatatgataactcatcttagaaatatacttatggttaaagtaagcaaaaat
ccaaatgaaatattagatatgtccagtgaaaatattgatttagtaaaagagcagtctgaa
aaaataagaatagaagaaataatgagggatataaaaatacttcaagaagcagaacaacaa
tctaaatgggtaaagcaaaacagaatatatttagaattggctgtacttaaaatgtgtaaa
atagaatatgatacatctaaagaagttatactttctaggcttaataaaatagaagagctt
ataaaatcaggtaatataaaattagcaataaatgaagaaaagaaaaaaatagagccaaag
gaatttaatctaaaaaaagaaaaagaaagtatggaacatagtaaaatagaaaaaaattca
ttagaagattataataaggactctaaattaactgtagaaactgtcaaaaaaatgtggcac
gatatattagaagcttttaaagcaagaagacttatggtattatatgcagctttagttact
gcaaacataacagattgcaaagaaggcattattactttaaattataataagcagtattct
tttaataaaaagagattagaaaagccagaaaataataaagtagttcaggaaattttttct
gaggtactaaaagagaaaattagaataatatatattgtagaggaaaaggctaaagaagaa
aatttaccagaagagattttaaaaaatacttttggagagaatatactagaaataattgat
gaatag
DBGET
integrated database retrieval system
