Clostridium botulinum B1 Okra: CLD_0972
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Entry
CLD_0972 CDS
T00671
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLD_0972 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbb01007
]
CLD_0972 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbb03016
]
CLD_0972 (lysS)
Enzymes [BR:
cbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CLD_0972 (lysS)
Amino acid related enzymes [BR:
cbb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CLD_0972 (lysS)
Transfer RNA biogenesis [BR:
cbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CLD_0972 (lysS)
Prokaryotic type
Other AARSs
CLD_0972 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ACA46580
UniProt:
B1IGJ2
LinkDB
All DBs
Position
complement(3831739..3833253)
Genome browser
AA seq
504 aa
AA seq
DB search
MSKEDNVINSFEEQANELMKERFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDLEG
KTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTFDIGDIISVTG
TVFKTKTGETSIHITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIK
RTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKR
LIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVL
GTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKNDIEARTIAKEKHIEFKKELK
DCTKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVC
NAYSELNDSIVQKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIM
FLTDTHSIRDVILFPTMKPQPNNQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaaggaagataatgtgataaacagttttgaagaacaagcaaatgaattaatgaag
gaaagattccaaaagttaaaggaacttcaatctaatggcaaagatccatttgatgtttat
aaggttgaaagaacccatacttcaaaagaagtaaaggataattatgaagatctagaagga
aaaactgttacagtggcaggaagacttatgtcaaaaagagttcatggaaaagctggattt
tcagatatacatgatagatatggaaaaattcaattatacataaagataaatgatgtaggg
gaagaaaaacttaaagaatataagacttttgatataggtgatataataagtgtaacagga
acagtttttaaaacaaaaacaggagaaacatcaatacacataacagattttcaattagtt
tgtaaatctttaagaccattaccagaaaagtggcatggattaaaagatccagatttaaga
tatagacaaagatatgtagatttaataataaatcaagatgttagagatacttttataaaa
agaacagctataattaagtctatgagagaattcttggataatagaggatttttagaagta
gaaacaccaatattatcaccaatagcaggcggggcagcagctaagccttttattactcat
cataatgctttagatatagatatgtatcttagaatagctactgaattatatctaaaaaga
ttaatagtaggtggctttgaaaaagtatatgagattggtaaaaactttagaaatgaagga
atagatataagacataatccagaatttacagctatagaattatatgaagcttatgcggat
tataatgatatgatggaaatcacagaaaatatgatagcttatatatgcgaaaaagttcta
ggtacaactaaagttgaatatgaaggagcagaaatagattttacaccaccatggagaaga
ttaactatggtagatgctgtaaaggaatatgcaggagtagattttaacattataaaaaat
gacatcgaggcaagaacaatcgcaaaagaaaaacatatagaatttaaaaaagaattaaag
gattgcacaaaaggtgatgtacttataggattatttgaggaattctgtgaagacaagtta
atgcaacctacttttatttgtgattatccagtagaaaattcacctcttacaaaaaagaaa
agaggaaatgaagcatttactgaaagatttgaaggctttgtatttggaagagaagtatgt
aacgcatattctgaattaaatgattctatagttcaaaaagaaagattcatgcaacaatta
aaggaaagagaattaggtgatgatgaagcttatatgatggatgacgactttataacttca
ttagaagtaggtatgccaccgacaggaggattaggaataggtattgatagattaataatg
ttcttaacagatacacattctataagagatgttatactattcccaactatgaaaccgcaa
cctaataatcaataa
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