Clostridium botulinum B1 Okra: CLD_1470
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Entry
CLD_1470 CDS
T00671
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLD_1470 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_1470 (ruvB)
Enzymes [BR:
cbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLD_1470 (ruvB)
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLD_1470 (ruvB)
RecFOR pathway proteins
CLD_1470 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
RNA_helicase
nSTAND3
TIP49
Bac_DnaA
AAA_24
DUF815
AAA_22
NB-ARC
MCM
AAA_14
AAA_2
Sigma54_activ_2
AAA_16
NTPase_1
AAA_18
Parvo_NS1
AAA_3
MerR_2
TsaE
AAA_28
ABC_tran
IstB_IS21
AAA_17
AAA_25
NPHP3_N
RsgA_GTPase
AAA_7
AAA_11
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACA43990
UniProt:
B1IMF3
LinkDB
All DBs
Position
complement(3314283..3315311)
Genome browser
AA seq
342 aa
AA seq
DB search
MENRMVTPFDVEDDREQYSLRPTTLKEYIGQKKVKANLDIFIKAAKKRSESLDHVLFYGP
PGLGKTTLANIIANEMTGNLKVTSGPAIEKAGDLAAILTSLTDYDVLFIDEIHRLNRSIE
EILYPAMEDYALDIVIGKGAAAKSIRLDLPKFTLIGATTRVGLLTSPLRDRFGMLCAMEF
YTDEELMEIVVRSAAILNVNICREAAFEIGKRSRGTPRIANRLLKRVRDYCDVKHDGDID
LQGAKAALDLLEVDKEGLDKIDNKILEAIIFNFKGGPVGLETLAYFIGEELDTIEDVYEP
YLIQKGFIMRTPRGRVASEKAYNHFGVTKKEEKDNQVSIFNK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagaatggtaactccttttgatgtagaagatgatagggaacagtatagctta
agacctactacattaaaagaatacataggtcaaaaaaaagtaaaagccaatttagatata
tttataaaagcagctaaaaaaaggagcgagtctttagatcatgtgcttttttatggacca
cctggactaggtaaaactacccttgctaatatcatagctaatgaaatgacaggtaattta
aaagtaacttcaggtccagctatagaaaaagcaggagatttagcagctatattaactagt
ttgacagattatgatgttttatttatagatgaaattcatagattaaatagatctatagaa
gaaatattatatccagccatggaagattatgctttagatatagttataggtaagggcgca
gcagcaaagtctataagattagatcttcctaaatttactcttataggagccactacaaga
gtgggattattaacatctcctttaagagatagatttggtatgttatgtgctatggagttt
tatacagacgaggaacttatggaaatagtagtaagatcagcagctatattgaatgtgaat
atttgtagagaagctgcttttgaaataggaaaaagatctaggggtactccaagaattgct
aataggctgttaaaaagagttagagattattgtgatgttaaacatgatggtgatatagac
ttacagggagcaaaggcagctctggacttattggaagtagataaggaaggtttagataaa
atagacaataaaattttagaagctataatttttaattttaaaggaggacctgttggatta
gaaacattagcttattttataggggaggaactagataccatagaggatgtttatgaacca
tatcttatacaaaagggatttataatgagaactccaagaggaagagtggcctcagaaaaa
gcatataaccattttggagtaacaaaaaaagaagaaaaggataatcaagtatctatattt
aataaataa
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