Clostridium botulinum B1 Okra: CLD_1639
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Entry
CLD_1639 CDS
T00671
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03420
Nucleotide excision repair
cbb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLD_1639
03430 Mismatch repair
CLD_1639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_1639
Enzymes [BR:
cbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLD_1639
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLD_1639
MMR (mismatch excision repair)
Other MMR factors
CLD_1639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
ResIII
DEAD
UvrD_C_2
NACHT
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACA46792
UniProt:
B1ILH1
LinkDB
All DBs
Position
complement(3147406..3149697)
Genome browser
AA seq
763 aa
AA seq
DB search
MSIEKESFNIEKEKLDETIEWIEEKITSLKEREEHISNKINEINKEVKGAYNYEVEALQN
SLQINRKNLNSYKSSVSVPYFARIDFKEKLKDSESFYIGKVGLLDEEDKEEMVVDWRSPI
ADLYYSGVQGKASYEAPIGNIEGELLLKRKFIIKNKKLIDAFDEGINEIILNFNGEDEQN
REKALIDEFLKINLEENRGNKLKDIVSTIQKEQNDIIRADMYKPLIIQGSAGSGKTTIAL
HRIAYLLYKYKNKITGEDIIILAPNKLFLDYISEVLPNLGVDKVKQSTFNKLSKEILNFN
YEIIDKDKKLSKIIENKNRKENKFITNSNKLKGSLVYKKMLDRYIKYLELNDMFIDDIKI
DGYVIFTSREIIRLYKNDLKHLPLNKRKIEIGRYLKNKIETKIQDVWNDIDKDYILKIRE
VRAKYEGEEERTNIIKLYEERDNKKEKIKLEAEEVLNKTIREWLIDDVVDVYRDMYIDEE
NLIYATSGIIPEVLVNYIKNKIEKEIENEKIDEEDLAALLYLKIKIDGVDNYKFAHMVID
EAQDYSPLELYVLKLLSKARGYTIVGDLGQSIYYYKGIENWEKLIKEVYEEGEYIPLKQS
YRSTVEIVDFANKVLRKQKNNLEPAKAVLRHGKHPKKIQYKDEKDFYEKLNSVIETIEEK
KDKTIAIICKDYEQCESLKESLHLKEEKQWEIVTKDTEMLPKRIIIPSYITKGLEFDCSI
IYDCSDENYRETELDKKILYVVLTRALHEEYIFYKDNITKLLI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgaaaaagaaagttttaatattgaaaaagaaaaactagatgaaactatcgaa
tggatagaagaaaaaataacgtctttaaaggaaagagaagaacatatatctaataaaata
aatgaaataaataaggaagttaaaggagcatataattatgaagtagaggctcttcaaaat
tctttacaaataaatagaaagaatttaaattcttataaatcatcagtttctgtaccttat
tttgctagaattgattttaaggaaaaattaaaggatagtgagagtttttatataggaaaa
gtagggctattagatgaggaagataaagaagagatggttgtagattggagatcgcctata
gcagatctttattatagtggcgtacaaggtaaagcttcctatgaagctcctattggaaat
atagaaggggagcttttacttaagagaaagtttattataaaaaataaaaagctaatagat
gcctttgatgaggggataaatgaaattatattaaattttaatggggaagatgaacaaaat
agagaaaaggctttaatagatgaattcttaaaaattaacttagaagaaaatagaggaaac
aaattaaaagatatagtttcaactatacaaaaagaacagaatgatattataagagcagat
atgtataagccgcttataatacaaggttctgcaggttcaggaaaaactactatagctctt
catagaatagcctatttattatataaatataaaaataaaattacaggagaggatataata
atactagctcccaataaattgtttttagattatatatctgaagttctccctaatttagga
gttgataaagtaaaacaaagcacttttaataaactttctaaagaaatattgaatttcaat
tatgaaataatagataaggataaaaaattatctaaaattatagaaaataaaaatagaaaa
gaaaacaaatttataactaatagtaataaattaaaaggttctttagtttataaaaaaatg
ctagatagatatataaaatatttggaattaaatgatatgttcatagacgatataaaaata
gatggttatgtaatatttacttctagagaaataataagactttataaaaatgatttaaag
catcttccgctaaataaaagaaaaattgaaataggaagatatttaaagaacaaaatagag
acaaaaattcaagatgtatggaatgatatagataaagattatatcttaaaaataagagaa
gtaagagcaaaatacgaaggtgaagaagaaagaactaatattataaaattatatgaagaa
agagacaataaaaaggaaaaaataaaattagaagcagaagaagtactaaataaaactatt
agagaatggcttattgatgatgtagtagatgtatatagagatatgtatattgatgaagaa
aacttaatttatgccacatcaggcataataccagaagttttagttaattatataaaaaat
aaaatagaaaaagaaatagagaatgaaaaaatagatgaagaagatctagcagcactttta
tacttaaaaataaagatagatggagtagataattataaatttgcccatatggttatagat
gaggctcaagattatagtcccttagaattatatgtattaaaattgctttcaaaagctaga
ggatatactatagttggtgatttaggtcaaagtatatattactataaaggcatagaaaac
tgggaaaaattaattaaagaagtatatgaggaaggagaatatattccactaaaacaaagt
tatcgttctacagtggaaatagtagattttgcaaataaagtactaagaaaacaaaaaaat
aatttagaaccagctaaagcagtgttaaggcatggaaaacatccaaaaaagattcagtat
aaggacgaaaaagatttctatgaaaaattaaatagtgttattgaaaccatagaagaaaag
aaagataaaactatagcaataatctgcaaagattatgagcagtgtgagagtttaaaagag
tctttacatttaaaagaagaaaaacaatgggaaatagtaactaaagatactgaaatgtta
cctaagagaataattataccatcatacataacaaaaggtttagaatttgattgttctata
atttatgattgtagtgatgaaaattatagagaaactgaattagacaaaaagattttatat
gtagttctaacaagagcattgcatgaagagtatattttttataaagataatataactaag
ttattaatataa
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