Clostridium botulinum B1 Okra: CLD_1970
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Entry
CLD_1970 CDS
T00671
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00260
Glycine, serine and threonine metabolism
cbb00460
Cyanoamino acid metabolism
cbb00630
Glyoxylate and dicarboxylate metabolism
cbb00670
One carbon pool by folate
cbb00680
Methane metabolism
cbb01100
Metabolic pathways
cbb01110
Biosynthesis of secondary metabolites
cbb01120
Microbial metabolism in diverse environments
cbb01200
Carbon metabolism
cbb01230
Biosynthesis of amino acids
cbb01240
Biosynthesis of cofactors
cbb04981
Folate transport and metabolism
Module
cbb_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CLD_1970 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CLD_1970 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLD_1970 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CLD_1970 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CLD_1970 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CLD_1970 (glyA)
Enzymes [BR:
cbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CLD_1970 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACA44798
UniProt:
B1IJJ8
LinkDB
All DBs
Position
complement(2772174..2773415)
Genome browser
AA seq
413 aa
AA seq
DB search
MDFTNLKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHK
RYYGGCEFVDEVEDLARERLKKLFVAEHANVQPHSGSQANMAVYMSVLQTGDTILGMDLS
HGGHLTHGSPVNFSGKLYNFISYGVDKETETIDYDQLKKIALENRPKMIVSGASAYPRII
DFEKIREICDEIDAYMMVDMAHIAGLVATGIHPSPVPYADFVTTTTHKTLRGPRGGAILC
KEKYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKN
YGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRI
GTPAVTTRGFKEEEMKKIAYFMNYSIEHREENLSQIKEQIKEICKKYPLHQNA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggactttacaaatttaaaaaacacagatccagagctattagacatgataaagaaagaa
gaggaaagacaagaatataatatcgaattaatagcttcagaaaattttactagtttatct
gtaatggaggctatgggatctttattgacaaataaatatgcagaaggatacccacataaa
agatattatggaggatgtgaatttgtagatgaggtagaggatttagcaagagaaagatta
aaaaaattatttgttgcagaacatgccaatgtacaaccacattctggttcacaagccaat
atggcagtttatatgtctgtgcttcagactggtgatactatattaggtatggatttatcc
catggcggacatttaacccatggaagtccagtaaatttttcaggaaaattatataatttt
atatcctatggtgtagataaagaaacagaaactatagattatgatcaattaaagaaaata
gccttagaaaatagacctaaaatgatagtatctggagctagtgcttatcctagaattata
gattttgaaaagataagagaaatttgtgatgaaatagatgcttatatgatggtagatatg
gctcatatagcaggattagtagctacaggaatacatccatcaccagtaccttatgcagat
tttgttacaacaactactcataaaactttaagaggacctagaggtggggctattttatgt
aaagaaaaatatgcaaaagcagtagataaagctatattcccaggcattcaagggggacca
ttaatgcatactatagcagcaaaagccgtttgttttggggaagctttaagagaagattat
aaagaatatatgcagcaagttgttaaaaatactaaagttttaggagaagaattaaaaaat
tatggatttagactaatatctggtggtacagataaccatttattactaatagatttaact
aataaaaatataacaggaaaagatgcagaaaaacttttagattcagtaggaattactgtg
aataaaaatacaataccttttgaaactttaagcccttttataactagtggaattagaata
ggaactccagcggtaactacgagaggatttaaggaagaggaaatgaaaaaaatagcctat
ttcatgaattattctatagaacatagggaagagaatttatctcaaataaaagagcaaata
aaagaaatttgtaaaaaatacccattgcatcaaaatgcataa
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