Clostridium botulinum B1 Okra: CLD_2203
Help
Entry
CLD_2203 CDS
T00671
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbb
Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbb03032
]
CLD_2203 (topA)
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_2203 (topA)
Enzymes [BR:
cbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLD_2203 (topA)
DNA replication proteins [BR:
cbb03032
]
Prokaryotic type
DNA Topoisomerases
CLD_2203 (topA)
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLD_2203 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Toprim_4
HypA
DUF2621
Motif
Other DBs
NCBI-ProteinID:
ACA44441
UniProt:
B1II68
LinkDB
All DBs
Position
complement(2557472..2559574)
Genome browser
AA seq
700 aa
AA seq
DB search
MGQKMGQNLVIVESPAKAKTIKKYLGKNYVVEASMGHVRDLPKSQLGVDIENNYDPKYIT
IRGKGELLDKLRKEAKKSSKVYLATDPDREGEAISWHLAHVLKIDESEECRIEFNEITKT
SIKKAIKSPRRINENVVDAQQARRVLDRLVGYKISPILWSKVKWGLSAGRVQSVALRMIC
DREREIEEFIPKEYWTIECEVYKEKNKKPFIIKLTTKSGKKIEINNEEEAIEAIQDLKKG
EFIVKKIKKTKKNKNPLAPFTTSTLQQDSYKKLNFSTKKTMSIAQQLYEGIDIKGFGAVG
LITYMRTDSIRISEEAQKSTLEHIKSNFGEEYIPKTPRVFKGKKNIQDAHEAIRPTNIEI
TPTLAKESLTPQQYKLYELIWKRFVASQMASCILDSTSISIENGKYGLRASGSLIAFDGF
MKVYEYSTEEEKDSIKIPELEENEVLKEKSINKSQHFTQPPARYSEASLVKTLEENGIGR
PSTYAPIISTILDRKYVEREKKTLKPTELGDIVNNILSEYFKQIVDLEFTADMENKLDYI
EEGKKSWREVVNDFFQPLIESIEIAEKEIAKITIEDKVTDVVCEKCGRNMVIKHGRYGDF
LACPGYPDCKNTKPIVEEIDVKCPKCGDGKVLIKKSRKGRKFYGCSNYPDCDFVSWSEPV
KEKCEECGSYMVKKQSKAKGEYYECANSECKHRKYLNNKE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaaatgggacaaaatttagtaatagtagaatcaccagcaaaagctaaaacc
ataaagaagtatttaggaaaaaactatgtagttgaggcctcaatgggacatgtaagagat
ttacctaaaagtcaattaggtgttgatatagaaaataattatgatcctaagtatataaca
ataagaggaaaaggcgaacttttagataagcttagaaaagaagctaaaaaaagctctaaa
gtatatttagcaacggacccggatagagagggagaagctatttcttggcatttagctcat
gttttaaaaatagatgagagtgaagaatgcagaatagaatttaacgagataactaaaact
tctataaagaaagcaatcaaatctccgagaagaataaatgaaaatgtagtagacgcgcag
caagcaagaagggttttggatagattagttggatataaaataagccctatattgtggagc
aaggttaaatggggattaagtgcaggtagagttcaatctgtggctttaagaatgatatgc
gatagagaaagagaaattgaagaatttataccaaaagaatattggactatagaatgtgag
gtatataaagaaaaaaataaaaaacctttcataataaaattaactactaaatcagggaaa
aaaatagagataaataatgaagaggaagctattgaagcaatacaagacttaaaaaaaggt
gaatttatagtaaaaaaaataaagaagacaaagaaaaataaaaatcctttagcacctttt
actacgagtactcttcaacaggattcttataaaaaattaaatttttctactaaaaagact
atgtctatagctcaacaactatatgaaggtatcgatatcaaaggttttggtgcagtaggt
cttataacctacatgagaacagattctataagaatatcagaagaagctcaaaaatcaacc
ctagagcatatcaaaagtaattttggggaagaatatataccaaaaactccaagagttttt
aaaggaaagaaaaatatacaggatgcccatgaagctataagaccaaccaatattgaaata
actcctacacttgctaaggaaagtttaacgcctcaacaatataaattatacgaattaata
tggaaaagatttgtagcaagccaaatggcttcttgtattttagattcaacatctataagt
atagaaaatggaaaatatggattaagagctagtggatccttaatagcttttgatggtttt
atgaaggtgtatgagtactctacagaggaagaaaaagatagtataaaaatacctgaattg
gaagagaatgaggttttaaaagaaaaatctataaacaaaagccaacattttactcaacca
ccagctaggtattctgaagcttctttagtaaaaactttagaagaaaatggtataggaagg
ccaagtacttatgctcctattatatctactatattagatagaaaatatgtagaaagagag
aaaaaaacattaaaacctacagaactaggagatatagtaaataatatactaagtgaatat
tttaagcaaatagtagatctagaatttacagcggatatggaaaataagctagattatata
gaagaaggaaaaaaatcttggagagaggttgtaaatgatttctttcagccattgatagaa
tccatagaaatagcagaaaaagaaatagcaaaaataactattgaagataaagtaacagat
gtggtatgtgaaaaatgtggaagaaatatggttataaaacatggaagatatggagacttt
ttagcatgtccaggatatccagattgtaaaaataccaaacctatagtggaagaaatagat
gttaagtgtcctaaatgtggagatggaaaagtcttaataaagaaaagtagaaaaggcaga
aagttttatggatgcagtaactatccagactgtgattttgtaagttggtcagaacctgtg
aaagaaaagtgtgaagaatgtggaagttacatggtaaaaaaacaaagtaaagctaaaggt
gaatactatgaatgtgctaattcagaatgtaagcatagaaaatatttaaataataaagag
taa
DBGET
integrated database retrieval system
