Clostridium botulinum B1 Okra: CLD_2225
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Entry
CLD_2225 CDS
T00671
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbb
Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbb03016
]
CLD_2225 (truB)
Enzymes [BR:
cbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLD_2225 (truB)
Transfer RNA biogenesis [BR:
cbb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLD_2225 (truB)
Prokaryotic type
CLD_2225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5344
Motif
Other DBs
NCBI-ProteinID:
ACA44038
UniProt:
B1II46
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All DBs
Position
complement(2534500..2535369)
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AA seq
289 aa
AA seq
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MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIM
EGTKTYRVEMKLGTTTDTYDREGTVLEEKEVSVSSTEVEKAIEKYKGDIEQVPPMYSALK
INGQKLYDLARKGIEVEREARKIHIYDICILSIDLPYIIFDVKCSKGTYIRSLCFDIGND
LGSGAVMWNLQRLEASPFNIKEAIKLEDLNEKNIKQYITPIDEALNDYEKLYLDKKFEKL
VLNGVILKDKRVLDNIEENKLYRTYIENDNFIGLGMKNAYGFKIHKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaataaatgttttaaaaccaaagggaataacatcctttgatgtagttaga
gatataagaaaaatagcgaaaataaaaaaagttggtcatacaggtacattagatccctta
gcttctggtgttctcccagtatgtataggtaaagctacaaaaatagtagactatataatg
gagggaaccaagacctatagagtagaaatgaaacttggcactactacggatacctatgat
agagaaggtactgtgttagaggaaaaagaagttagtgtatcttctacagaagtagaaaag
gctatagaaaaatataaaggtgatatagaacaagtgccacctatgtattctgccttgaaa
attaatggacaaaaactttatgatttagctagaaaaggtatagaggtagaaagagaagca
agaaaaatacatatatatgatatatgtattttaagtatagatctaccttatattatattt
gatgttaagtgttcaaaggggacttatataaggagtttgtgttttgatataggaaatgat
ttaggctcaggagcagtaatgtggaatctgcaaagattagaagcaagcccctttaatata
aaagaagcaataaaattagaagatttaaatgagaaaaatataaaacagtatataacacct
atagatgaagctttaaatgactatgaaaaattatatttagataaaaaatttgaaaaactt
gtactaaatggtgtaatattaaaagataaaagagttttagataatatagaagaaaacaag
ctatatagaacttacatagaaaatgataattttataggattaggaatgaaaaatgcatat
ggatttaaaattcataaattattaacttag
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