Clostridium botulinum B1 Okra: CLD_2234
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Entry
CLD_2234 CDS
T00671
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cbb
Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbb03009
]
CLD_2234
Enzymes [BR:
cbb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLD_2234
Ribosome biogenesis [BR:
cbb03009
]
Prokaryotic type
ribosomal protein modification factors
CLD_2234
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
TTRAP
Motif
Other DBs
NCBI-ProteinID:
ACA43904
UniProt:
B1II37
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Position
complement(2522623..2523960)
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AA seq
445 aa
AA seq
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MEKIKVALVSLGCDKNRIDSELMLYKLNEEAELVKNPKEAQVIIVNTCGFIETAKEESIN
TILQMASYKKTHNCKVLVVTGCLTQRYKGELKELIPEMDIMLGVNDYDKLLESIKVFLKS
GEKSFYHKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSRKKENI
LKEVENLAKQGVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRLLYCYPEE
ITKELIEEIKNNDKVCKYLDLPIQQISNSVLKRMGRKTTKETIINIIKKLRKEIEGITLR
TSLIVGFPGETEGEFSELKEFVSDVKLDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREE
EIMILQQSISKDINKEKIGKIYEVIVEGIKEDMYYGRNYEMSPEIDGEIYFEKDENVRIG
DIIKVKVTHSLEYDLIGVVYNELSK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaattaaagtagcattagttagcttaggttgtgataaaaatagaattgattca
gaacttatgctatacaaattaaatgaagaagcagaactagtaaaaaatcctaaagaagca
caggtaattatagtaaatacctgtggatttattgaaaccgctaaggaagaatctataaat
accattttacaaatggcttcctataaaaaaactcataattgcaaagtattagtagttaca
ggatgtttgactcaaagatataaaggggaacttaaagaacttatcccagaaatggatatt
atgttaggggtaaatgattatgataagttacttgaaagtataaaagtctttttgaaatca
ggggaaaaaagtttttatcataaatatagtgatacaaaaataaatgagggaaatagaata
ttaactacgccaacatacacagcctatgtgagaatagcagaagggtgtaataatttttgt
acttactgtgccataccacgcataagaggaaagtatagaagtagaaaaaaagaaaatata
ttaaaggaagtagaaaatctagctaaacaaggagttaaagaaataatattgatagctcaa
gatacaaccatgtatggaatagatatatatggcaaaaaagttttacatgagcttctaaga
gatatttctaaagttgaaggtgtaaagtggataagattattatactgttacccagaggaa
ataactaaggaacttatagaagagatcaaaaataatgataaggtatgtaaatatttggat
ttgcctatacagcagataagtaattctgttttaaaaagaatgggaagaaaaactacaaag
gaaactatcataaatataataaaaaaattaagaaaagaaatagaaggtattactttaagg
acttcattaatagtaggatttccaggggaaacagaaggagagtttagtgaacttaaagaa
tttgtttcagatgtaaaattagataaattaggtgtatttaaatattcaaaggaagaagga
acgtcagcagctcttatggaggaacaaatagatgaagaaataaaagaaaaaagagaagaa
gaaataatgatacttcagcaaagtatatctaaagacataaataaagagaaaataggtaaa
atatatgaagtcatagtagaaggcatcaaagaagatatgtattatgggagaaattatgag
atgtcaccggagatagatggagaaatttactttgaaaaagatgaaaacgtaagaattggt
gatataataaaggtgaaggtaactcatagtttagaatatgatttaataggagttgtttat
aatgaacttagcaaataa
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