Clostridium botulinum B1 Okra: CLD_2571
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Entry
CLD_2571 CDS
T00671
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00521
Streptomycin biosynthesis
cbb00523
Polyketide sugar unit biosynthesis
cbb00525
Acarbose and validamycin biosynthesis
cbb00541
Biosynthesis of various nucleotide sugars
cbb01100
Metabolic pathways
cbb01110
Biosynthesis of secondary metabolites
cbb01250
Biosynthesis of nucleotide sugars
Module
cbb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLD_2571 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLD_2571 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CLD_2571 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLD_2571 (rfbB)
00525 Acarbose and validamycin biosynthesis
CLD_2571 (rfbB)
Enzymes [BR:
cbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CLD_2571 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ACA45187
UniProt:
B1IFP4
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All DBs
Position
2206372..2207352
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AA seq
326 aa
AA seq
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MRVLLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGD
ICDSEEFNRTLKKYNPDYIINFAAESHVDRSISGPSVFGQTNFMGTLNLLQCAHEFWGSS
CADKRFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPVI
ITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFYG
TPGEVYNIGSGEEVSNVDMAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSSKIKNQLSW
ACSYKLEEGIKETIKWYKNNQTWWND
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagagttttacttgtaacaggcggtgcaggctttattggcagcaattttatacgatac
tttctggaaacaaacaaagactttattgtagttaattatgataagcttacctatgctgga
aaccttaataatttaaaggaagttgaaatgcttccgacttatcgctttgttaagggcgat
atatgtgacagcgaggaattcaataggacattgaagaagtataaccctgactatataatc
aattttgctgctgaatcacatgtagatagaagtataagtggaccttcagtatttggtcaa
acgaactttatgggaacacttaatttactccagtgtgctcatgaattctggggtagcagc
tgtgcggacaagcgttttttgcaggtctcaacggatgaggtatatggaagtattgagaat
gacagcgattattttatagaagattcaaatctcatgcctaacagtccttattcagcctca
aaggcaggagcagatatgatggtaagagcctttgggagaacttacggacttcctgttata
attacaagatgctgtaataattatggaccgtaccaatacagtgagaagcttattcctatc
tgtattataaaagctttaaatgatgagcctataccaatatatggtgatggcacaaatata
agagaatggattcatgtatcagatcactgttctgcaattataaaagcgttattttatggt
acgccaggagaagtttacaatattggaagtggagaagaggtttcaaatgttgatatggca
aagataattcttagtaatcttagcaaaccaacggatgccataaaaaaagtgaatgacagg
ttgggccatgacagacggtatgcgttggatagcagtaaaataaaaaaccagttaagctgg
gcttgcagctataagctggaagaaggaatcaaggaaacaattaaatggtataaaaataac
cagacctggtggaatgattaa
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