Clostridium botulinum B1 Okra: CLD_2833
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Entry
CLD_2833 CDS
T00671
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00900
Terpenoid backbone biosynthesis
cbb01100
Metabolic pathways
cbb01110
Biosynthesis of secondary metabolites
cbb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLD_2833
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLD_2833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cbb03011
]
CLD_2833
Enzymes [BR:
cbb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CLD_2833
Ribosome [BR:
cbb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLD_2833
Bacteria
CLD_2833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
CsrA
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
ACA43927
UniProt:
B1IM75
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All DBs
Position
complement(1926527..1928443)
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AA seq
638 aa
AA seq
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MNVILADKAGFCFGVKRALDTTINTKENLKSKIYTLGPLIHNNDVVNLLKDKGIEPISIQ
DVDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYKIVI
VGDENHPEVIGINGWCNNSAIISKDGANINNLDKKVCVLCQTTEKQENWEKVLTILIKNS
REILAFNTICNATQVRQQAAKKLSEKVDSMIVIGGKNSSNTTKLYEICKSNCKNTIHVEN
AKEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLNYMNEKEQQI
VVGKVVKGTIVSLNENELFVDLNYKSEGIIPKEEVTLDEESILKESFKVGDEIEAKIVRI
KNEDGYVVLSLKELHREKALKNLKEAFENKQTIKVIVKDAVDAGLICIYNGVRVFIPASH
IELSHVDDLEAYKGLELEVNIIEFIKDRYRTKIVGSRRNILKTVRNKHIEETWNSLEKDT
VVEGEVKRFTDFGAFIEINGVDGLLHVSEISWGRVEKPEDALKIGNKIKVYILDIDKENK
KLALSIKKLIEDPWKSVEIKYPIGNIVLGKVVRFANFGAFIELEPGVDGLVHISKISNKR
IDKPEEELTLGKEVKAKILEVNSVEKRIALSIKDVEEF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattttagcagataaagcagggttttgctttggtgttaaaagagctttagat
acaacaataaataccaaagaaaatttaaagagtaaaatttatactttaggtcctttgata
cataataatgatgtggttaatcttttaaaagacaaaggtatagaacctataagtatacag
gatgtagataaacttaacaaagatgatactattattataagatctcatggagtaccactt
caaactataaactatttaaaagacaaagggttaaatgttataaatacaacctgccctcat
gtggccaatatacaaattaaagctaaaaaatattatgaagaaggttacaaaatagtaata
gttggagatgaaaatcatccagaggttattgggataaatggttggtgtaataattctgct
attatctcaaaggatggtgccaatataaataacttagataaaaaagtttgcgtattgtgt
caaaccacagaaaaacaagaaaattgggaaaaggtccttactatattaattaaaaactct
agagaaatattagcttttaatactatatgtaatgcaacacaagtgcgccaacaagctgca
aaaaaattatctgaaaaagtggatagcatgatagttataggtggtaaaaatagttctaat
actactaagctttatgaaatatgtaaaagtaattgcaaaaatacaatacatgttgaaaat
gcaaaggaaatacctgagcacatatataaaaactcaaatattataggcgttactgccgga
gcatctacaccagattggattataaaggaggctattaataaaatgaataataatgatagt
ataatagaagtatcaaaaaatgaaatgcttaactatatgaacgaaaaggagcaacaaata
gtagttggaaaagtagtaaaaggaactatagtttctttaaatgaaaatgagttatttgtt
gatttaaactataaatctgaaggcattatacctaaagaagaagtaactttagatgaagaa
tctatattaaaagaatcctttaaggtaggagatgaaatagaagccaaaatagttagaata
aaaaatgaagatggatacgtggtactatccttaaaggaattgcatcgtgaaaaagcctta
aaaaatttaaaagaagcctttgaaaataaacaaactataaaagttattgtaaaagatgcc
gttgatgctggattaatatgtatatataatggtgttagagtatttattccagcttctcat
atagaactttcccatgtagatgacttagaggcatataaaggcttagaattagaagttaat
atcattgaatttataaaagataggtatagaactaaaatagtaggttcaagaagaaacata
ttaaaaactgttagaaataaacatatagaagaaacttggaactctttagaaaaagataca
gtagtagaaggagaagtaaaaagattcacagactttggagcttttatagaaattaacgga
gtggatggtttactacatgtttcagaaatatcctggggaagagtagaaaagccagaagat
gcattaaaaataggaaataaaataaaagtatatattttagatattgataaggaaaataaa
aaactagctttaagcataaaaaaattaatagaagatccttggaaaagtgtagagataaaa
tatccaataggaaatatagtattaggaaaagtagttagatttgcaaactttggagctttt
atagaattagaacctggtgtagatggcctagtgcatatatcaaaaataagcaataaaaga
atagataaaccagaagaagagttaactttaggaaaagaagtcaaagctaaaatactagaa
gttaattcagttgaaaaaagaattgcattaagtataaaagacgttgaagaattttaa
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