Clostridium botulinum B1 Okra: CLD_3094
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Entry
CLD_3094 CDS
T00671
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00550
Peptidoglycan biosynthesis
cbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLD_3094
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbb01011
]
CLD_3094
Peptidoglycan biosynthesis and degradation proteins [BR:
cbb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLD_3094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
Beta-lactamase
IP_trans
Motif
Other DBs
NCBI-ProteinID:
ACA43411
UniProt:
B1IKR2
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All DBs
Position
1619457..1621637
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AA seq
726 aa
AA seq
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MSNSKYRDKVIIRKRMMFVFALLILAFIGLVIKMGTIMIGQSPKLKEKAVDQWTSEVKID
AKRGRILDRNGNELAVSANVYRVDLDMNTLRSTMEEKKLSKNDVASKLSKALDMEQKEVE
KVLNKKLPSGLPLASATLKRRIEKDKADKVRELDLRGILVSADTKRYYPNNNFLSHVLGH
TNSDGKGLTGVELYYNNILSGKPGVRIAETDNKSKELPYTISEYTKPEDGKDLVLTIDEM
IQHFSEKTAEQALKDNKAKAVSVVVMDPRTGEVLAMANKPDYNPNDPWQEGKSYEELQQN
WRNRSVNDTFEPGSVFKVFTAATALEENLITSEDKFTCGGSITIGKRTIRCWKSGGHGTQ
NFIEILKNSCNVGFAQLGHKIGKEKLNSYIQKFGFGKKTGIDLPGEAPGITKKTENISDI
DLATISFGQANTLSIVQYLQAFNAVANGGNLIKPHVMKEVGHFDEEKNKEIIEKKNTIES
KQILNSQKMATLRSYLEKVVSEGGGKKAYIAGYHIGGKTGTAQKAGKGGYMPGKYVASFA
GMAPADNPRITVFVSIDEPDPSNYYAGQIAAPAAQGLFKDIFNYLALKSDAQGEDIAKSL
LKDITIPEVRGKSKEEAQKILKDLKLDCEIQSEGEYIVDMNPKPGYTVKEGSKIVLYTGN
SQNYNKVVVVPNVKGYTVEQAMSVLNSIGLRGDIQGDGIISHQSIEANKEVKKGTMVNLK
AEPIGD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaatagtaagtacagagacaaagtaataattagaaaaagaatgatgtttgtattt
gctcttctaattttagcttttataggcttagtaataaaaatgggaactataatgataggt
cagtctccaaagttgaaagaaaaagctgtggatcaatggacaagtgaagtaaaaattgat
gctaaaagaggtagaatattagatagaaatggtaatgaactagcagtaagtgctaatgta
tacagagtagatttagatatgaatactttaagaagtaccatggaagaaaaaaaactatct
aaaaatgatgtagcatcaaaactttcaaaagcattagatatggaacaaaaagaagtagaa
aaagtattgaataaaaagcttccaagtggattacctttagcctctgctactttaaaaaga
agaatagaaaaggacaaggctgacaaagtaagagagctagatttaagagggattttagta
tctgcggacactaaaagatactatcctaataataattttttatctcatgtattaggacat
acaaattctgatggaaagggacttacaggagtagagttatactataacaatatattatca
ggtaagccaggagtaaggattgctgaaacggataataaaagcaaggaattaccttatacc
atttcagaatacactaaaccagaggatgggaaagatttagtattaaccatagatgaaatg
atacaacactttagtgagaaaacagcagagcaagctttaaaggataacaaagcaaaggca
gtatctgtagtagtaatggatcctagaactggagaagtactagctatggcaaataagcca
gattataatcctaatgatccttggcaggaagggaaaagctatgaagaacttcaacaaaac
tggagaaatagatcggttaatgatacttttgaaccaggatctgtatttaaagtttttaca
gcagctaccgctttagaggaaaatttaataacctccgaggataagtttacttgtggtgga
agtataactatagggaaaagaactatacgttgctggaaaagtggagggcatggtactcaa
aattttatagaaatacttaaaaactcttgtaacgtaggttttgcacagttaggtcataag
ataggtaaagaaaaattaaattcatatattcaaaaatttggttttggtaaaaaaactggt
atagatcttccaggagaagctccagggataacaaagaaaacggaaaatatatcagatata
gatttagctacaatatcctttggtcaagctaacacgttgtctatagtacaatatctccaa
gcttttaatgcagtggctaatggaggaaatcttataaaacctcatgttatgaaagaagta
ggacattttgatgaggaaaaaaataaagaaataatagaaaagaaaaataccatagaaagc
aagcaaattttaaatagtcaaaagatggctaccctaagaagctacttagaaaaagtagtg
tcagaagggggcggtaagaaggcttatatagcaggttatcatataggtggcaaaactggt
acagctcaaaaggctggtaagggtggatatatgcctggtaaatatgtagcttcctttgca
ggaatggcaccagctgataatccaagaataacagtatttgtttctattgatgaaccggat
ccttcaaattactatgcaggccaaatagcagctccagcagcacaggggctatttaaagat
atatttaattatttggcattaaaaagtgatgcccaaggggaagatatagctaaaagtctt
ctaaaggatataactattcctgaagttagagggaagtcaaaagaagaagcacaaaaaata
ttaaaagatttaaaattagattgtgagatacaatctgagggagaatatatagtagatatg
aatcctaaaccagggtatactgtaaaagaaggcagtaaaattgttctttacacagggaac
agtcaaaattataataaagtagtagttgttccgaatgtaaaagggtatacagtagaacag
gccatgtctgtattaaatagtataggcttaagaggggatatacagggtgatggaattatt
tctcatcaaagtatagaagcaaataaggaagttaaaaaaggaactatggttaacttaaaa
gcagaaccaataggagattaa
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