Clostridium botulinum B1 Okra: CLD_3638
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Entry
CLD_3638 CDS
T00671
Symbol
cobA_hemD
Name
(GenBank) uroporphyrinogen III synthase/methyltransferase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00860
Porphyrin metabolism
cbb01100
Metabolic pathways
cbb01110
Biosynthesis of secondary metabolites
cbb01120
Microbial metabolism in diverse environments
cbb01240
Biosynthesis of cofactors
Module
cbb_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CLD_3638 (cobA_hemD)
Enzymes [BR:
cbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
CLD_3638 (cobA_hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
CLD_3638 (cobA_hemD)
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GFIT
Motif
Pfam:
HEM4
TP_methylase
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACA44710
UniProt:
B1IHD2
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Position
1041344..1042804
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AA seq
486 aa
AA seq
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MSKVYLIGAGPGDEELITLKAIGALKKCTAVMYDRLANGELLKYLAPNCEIYYCGKEPGC
HYKSQDEINKMLVKLAKQGHIVGRIKGGDPYVFGRGGEEALDILEENIEFEVIPGVTSPV
SVLNYAGIPITHRGISRGFHIFTAMTKDKLDIDWKSVVNIGGTLVFLMGLGRLELITKGL
IENGMDKESKVAVVMKGTTSKQKKVIGNLENIVEKVKEAKLESPVIIVVGEVVSFSDKLN
WYEKKPLFGRNICITRTKEQAKELKVQLLDLGAEVTEINSIEIKNAEENLKPYLNRLKEY
DYIALTSVNAVKIFFDYLIKENIDIRNINAKFAAIGPATSEAIKVRGIMPSIKSKHFVAE
SLFEEMKKHVQSGDKVLVPRSKDARSFLVDALKKEGCIVDEVHIYETLCGQSSHTERFED
ADTVLFTSPSTVKNMISMVGIDSIKEKSIIAIGPITAAELYKNNIECSICDEYSINGIID
KLLDLN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtatatttaattggtgcagggccgggggatgaagaactaataactttaaaa
gctataggagccctaaaaaaatgtactgcagttatgtatgatagattagcaaatggagaa
ttgttaaaatatttagcaccaaattgtgaaatttattattgtggaaaagaaccgggctgt
cattataaaagccaggatgaaataaataaaatgctagttaaattagcaaaacaaggtcat
attgtaggaagaataaaaggtggagatccctatgtatttggaagagggggagaagaagcc
ttagatattttagaagaaaatatagaatttgaagttatacctggtgtaacttctccagta
tctgtattaaattatgcaggaattcctataacccatagaggaatatcaagagggtttcat
atttttacagctatgactaaggataaattagatatagattggaagtctgtagttaatata
ggaggaaccttagtatttttaatgggtcttggaagattagaattaataactaaaggtctt
atagaaaatggaatggacaaagaaagtaaagtagcagtagttatgaaaggaactacctca
aagcaaaaaaaagttataggtaacttagaaaatatagtagaaaaagtaaaagaagctaaa
ctagagtcaccagtaataatagtagtaggagaagtagttagtttttcagataaattaaat
tggtatgaaaaaaagcctttattcggaagaaatatatgcataacccgtacaaaagagcaa
gctaaggagttaaaagttcaacttttagatttaggggctgaagtcacagaaataaattct
atagaaataaaaaatgcagaggagaacttaaagccttatttaaatagattaaaagaatat
gattatatagctttgactagtgtaaatgcagttaaaatattttttgattatttaattaaa
gaaaatatagatattagaaatattaatgctaaatttgcagctataggaccagctactagt
gaagcaataaaagtgcgaggaataatgccaagtataaaatcaaagcattttgtagctgaa
agcctttttgaagaaatgaaaaagcatgttcaaagtggggataaggtacttgtacctcgc
tcaaaagatgcaaggtcctttcttgtagatgcattaaaaaaagaaggttgcattgtagat
gaagtacatatatatgaaactttatgtggacaatcttctcatactgaaagatttgaagat
gcagatacagtattatttacaagtccatcaactgttaaaaatatgatttccatggtgggg
atagatagtataaaagaaaaaagtattatagcaataggtcctattacagcagcagaatta
tataaaaataatatagaatgtagtatttgtgatgaatattctataaatggcataatagat
aaacttttagaccttaactag
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