Coxiella burnetii Dugway 5J108-111: CBUD_0021
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Entry
CBUD_0021 CDS
T00583
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03030
DNA replication
cbd03410
Base excision repair
cbd03420
Nucleotide excision repair
cbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBUD_0021 (polA)
03410 Base excision repair
CBUD_0021 (polA)
03420 Nucleotide excision repair
CBUD_0021 (polA)
03440 Homologous recombination
CBUD_0021 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbd03032
]
CBUD_0021 (polA)
03400 DNA repair and recombination proteins [BR:
cbd03400
]
CBUD_0021 (polA)
Enzymes [BR:
cbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBUD_0021 (polA)
DNA replication proteins [BR:
cbd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CBUD_0021 (polA)
DNA repair and recombination proteins [BR:
cbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CBUD_0021 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBUD_0021 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABS77807
UniProt:
A9KEW5
LinkDB
All DBs
Position
complement(23466..26174)
Genome browser
AA seq
902 aa
AA seq
DB search
MNTVFFIMTTLSSKPLILIDGSSYLFRAYYALPPLTNRKGQPTGAMYGVINMLRKLMVEY
QPDYVAVVFDPKGKTFRHDLYHTYKANRIEMPNELRSQIKPLFEIIRALGFPLIIKEGYE
ADDVIATLAKKAKEKGMPVLVSTGDKDLAQIVNEHVTLVNTMTDRLLNSKGVLEKFGVPP
EKIIDYLTLTGDTTDNIPGVPKVGPKTAVKWLSQYDSVENLIKHAHEIKGKVGENLRACI
DDLPLMRRLVTVISDLPLEENPTDLIQTEKNREKLIELFTEYEFKSWLAELLANQDKKVA
AFQYATITDKKTFEKWMKKLADAKVFAFDTETTDFNAIQAKLVGVSFAVSPHEAAYVPLW
HDYTGAPAQLDKEEVLRELKPLLEDPNKTIICQNLKYDAEVLAKEGLTIRAKTYDTLLAS
YVLNSSSTRHDLNTLALKYLGRIMVKFEDVAGKGVKQISFNHVTLDKATAYAAEDADVTL
QLHHKLMPLIEKEKNLKKVFEQIEMPLVPILMQMEMRGVLVDTAMLQAQSIELGGRIALL
EQQAYKLAGREFNLSSPKQLQTILYEELKLPIFKKTPGGQPSTAENVLQDLALDYPLPKV
ILEHRSLTKLKTTYTDRLPVQVHPASRRIHTSYNQTVTSTGRLSSNNPNLQNIPIRTEEG
RKIRRAFIAPPGFQMVAADYSQVELRIIAHVSKDPSLIKAFDKEWDIHRATAAEVFGVNL
EQVTPEQRRRAKAINFGLLYGMSSFGLGRQLGIGRDLAQEYIDIYFKRYPKVHEYMQKIR
IVAFTQGYVETLFGRRVYLPDIHASNMQRRRAAERAAINAPMQGTAADIIKIAMIKVSDW
LQKNPVEAHLIMQVHDELVFEVAEKDLEKVIPQIKKAMEEAVALSVPLVVDVGVGGNWDE
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccgttttttttattatgacaacattaagttccaaacccctcattttgattgat
gggtcttcttatctctttcgagcttattatgcactgcccccgctgacgaaccgcaaaggc
cagccaacgggggcgatgtacggcgtcattaatatgctgcgaaaactaatggtggaatac
caacccgattatgtcgcggtggtgtttgacccgaagggtaaaacctttcgccatgatttg
tatcacacctacaaagctaaccgtatcgaaatgcctaatgaattgcgaagtcaaattaag
cccttgtttgaaatcatccgagcgctcggctttcctcttattattaaggagggctatgaa
gccgacgatgtgatcgctacgttagctaaaaaagcaaaagaaaagggaatgccagttttg
gtttcaactggcgataaagacttagcccagattgtcaatgaacacgtgacattggttaat
acgatgactgaccggttgctcaattcgaaaggcgttcttgaaaaatttggcgtgccgcct
gagaaaattatcgattatttaaccttaactggcgacaccaccgacaatattccgggcgtc
cccaaagtcggccccaaaaccgccgttaagtggctcagccaatacgattctgtcgaaaat
cttataaaacatgcgcatgaaattaaaggaaaagttggtgaaaaccttcgcgcttgtatc
gatgacctgccgttgatgcgccgattagtaacggttatttccgatttgcccttggaagaa
aatcccacggatttaatccaaacggaaaaaaatcgcgaaaaattaattgaactgtttacc
gaatatgaatttaaatcttggcttgccgaacttctggcaaaccaagataaaaaagtagcc
gcttttcaatacgccacaatcacagataaaaaaacttttgaaaaatggatgaagaaatta
gccgacgctaaagtattcgctttcgacacggaaacgactgattttaatgcgatacaagca
aaattagtcggcgtttcatttgcggtttccccgcacgaggcagcttatgtgccgctttgg
catgattatacaggcgcgcctgcgcagcttgataaagaagaggtattgcgggaattaaaa
cccttactagaagacccgaataaaaccatcatatgccaaaatttaaaatatgacgccgag
gttttggcaaaagagggactcactatccgagcaaagacttacgatacgctgctagcatct
tacgttttaaatagcagcagtacacggcacgatttaaatacattggcgcttaaatatttg
ggccgcataatggtgaaatttgaggatgtggcgggtaaaggagtgaaacaaatcagtttt
aatcacgttacccttgataaagccactgcgtatgcggcggaggatgcggatgtcactttg
cagcttcaccataaattaatgccattaattgaaaaagaaaaaaatttaaaaaaggttttt
gaacaaatcgaaatgccattagtgccgatcctcatgcaaatggaaatgcggggagtttta
gtggataccgcgatgctgcaggcacagagcatcgaactcggtggtcgcattgccttgttg
gagcaacaagcctataaattagcgggtcgcgagtttaatttgagttcgcctaaacaattg
caaacgattttatacgaagaactaaaactaccgatttttaaaaaaacccccggcggtcag
ccatcgacagcagaaaatgttttacaagatttagccttggattatcctttacctaaagtg
attttggagcaccgcagtcttactaagttaaaaacaacttatactgatcgtttgccagtg
caggtgcatccagcgagccgccgcattcacacttcctataaccaaaccgtcacctcaacg
ggacggttatcttcgaataatcccaacttacaaaacattcccatccgtacggaagaaggg
cgaaaaatccgacgcgcgtttattgcgccacctgggtttcagatggtggcggcggattat
tcgcaagtggaattacgtatcattgcacacgtttcaaaagatcccagcttaattaaggct
tttgataaggaatgggatattcatcgcgcgaccgcggctgaagtgtttggtgtgaacttg
gaacaagtgacgcccgaacaacgtcgccgcgcgaaagcaattaattttgggttgttgtac
ggaatgtcgagtttcggtttaggacgccaattgggaattgggcgcgatttagcgcaagaa
tacattgatatttattttaaacgctatcctaaagtgcatgagtacatgcaaaaaatccgc
attgttgcttttacccaaggctacgtagaaacacttttcggccgccgcgtttatttacca
gacatccacgcctccaatatgcagcgccgccgcgctgccgaacgcgcggcgataaacgca
cccatgcaaggcacagccgccgatattattaaaatcgccatgattaaagtcagcgattgg
ctccaaaaaaaccccgttgaggctcatttgatcatgcaagtgcatgacgaactggttttt
gaagtggccgaaaaagatttggaaaaagtcatcccccaaatcaaaaaagccatggaagaa
gccgttgccctatctgtgccgttagtggttgatgtcggcgtcggggggaattgggatgag
gcgcattaa
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