Coxiella burnetii Dugway 5J108-111: CBUD_0393
Help
Entry
CBUD_0393 CDS
T00583
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CBUD_0393 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbd03021
]
CBUD_0393 (rpoD)
Transcription machinery [BR:
cbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBUD_0393 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
ABS76489
UniProt:
A9KDP1
LinkDB
All DBs
Position
complement(377250..379346)
Genome browser
AA seq
698 aa
AA seq
DB search
MPSRKKKSSVTKTKKKTTGKKARVTAKAKPSVKSKLKTVKRAPAKPKSVTVAKTKSKKEK
AKVVTQPLPKTAEKKPSAPPSETQQPKIGENAAESQRLGFGALLEEAKNKGYLVHEDLIN
LLPNDYADPSQMEGIIGRLTEMGIKVFEIPPDADSLLLEEDTQSDDDEINEDVAEVLATE
TRTTDPVRMYMREMGSVELLTREGEIVIAKRIEEGIRQVMGAVVQYPELIEKFIKEYDTI
VATEGRLSDLLIGFFDEEESTASPVAPEARDKEAETSDEDDGGEGGSDEFGESGPDPLIT
QQHMEELKKLYGRYQNAIKRYGKKAPATLKHQKALAELFSTFKLSIKQFNRLTGQLRRML
RAARAQERLIMSYCVVKAKTPRKKFIASFPHNETNMKWLEQYKNENKEQAKRLEKYSKEI
YRAQRNLAQLEEQNNLNIQEIKEINRRVAIGEAKSRRAKKEMIEANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI
ETINKLNRISRQILQETGIEATPEELGRRMDMPEEKVRKVLKIAKEPISMETPIGEDEDS
NLGDFIEDINMESPVDFATSAGLMEATREILSTLTPREAKVLRMRFGIDMNTDHTLEEVG
KQFDVTRERIRQIEAKALRKLRHPSRAEKLHSFIEVEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccaagccgtaaaaagaaatccagcgttaccaaaactaagaaaaaaacaactggtaaa
aaagcccgtgtaactgctaaagctaaaccttccgtaaagtcaaaacttaaaacggtaaag
cgcgcgccggcaaaaccgaaatcggtgacagtggctaaaactaagtctaaaaaagaaaag
gctaaagtcgtgacacagccattacctaaaactgctgagaaaaaaccttctgcgccgcct
tcagaaactcaacaacccaagataggagaaaacgcagcagaaagccaacgtttaggcttt
ggcgcactcctagaagaagccaaaaataagggctacctggtacacgaagatttaattaac
cttctccctaacgattacgcagatccttcccaaatggaaggcattatcggtcgtttaacc
gaaatgggtattaaagttttcgaaattcctcctgacgccgattccctgcttttggaggaa
gatacccaatccgacgatgacgagatcaacgaggacgtggccgaagtattagcgacagaa
acccgaactactgatcccgttcgcatgtacatgcgtgaaatggggagcgtggagttgcta
acacgggaaggcgaaattgtcatcgccaaacgcattgaagaaggcatccgccaagtcatg
ggcgccgtggtccaataccctgaacttattgaaaaatttattaaagaatatgacaccatc
gtcgctactgaaggccgcttaagtgatctgcttatcggtttttttgacgaagaagaatcg
acagcctcccctgttgctccggaagcccgtgataaagaagctgaaacttcggatgaggat
gacggaggagaaggtggcagtgatgaattcggcgagagcgggcctgaccccctcattact
caacaacacatggaagagcttaaaaagttgtacggccgctatcaaaacgccattaaacgt
tatggcaaaaaagcgccggcaacgctcaaacatcaaaaagcgttggctgagttgttttca
acctttaagctttctatcaagcaatttaatcggctcaccggtcaattacgtcgaatgcta
agagccgcgcgcgctcaagaacgtttaatcatgagttattgcgtggtcaaagcgaaaacg
ccacgtaaaaaatttattgcttcctttccgcataatgaaaccaacatgaaatggttggaa
caatacaaaaatgaaaacaaagaacaagcgaaacgactggaaaaatacagcaaagaaatc
taccgcgctcaacgaaacctggcgcaactggaagaacaaaacaatttaaacattcaagaa
atcaaagaaattaatcgtcgcgttgccatcggcgaggcaaaatcacgccgtgctaaaaaa
gaaatgatcgaagctaatttacgtctggttatttcgatcgcaaaaaaatacaccaatcgg
gggctgcaatttctggatctcatccaggaaggaaacattggcttaatgaaagccgttgac
aaatttgaataccgccggggttataaattttcaacctatgccacgtggtggattcgccaa
gcaattacgcgttcgatcgccgaccaagcccggactatccgcattcctgtgcacatgatt
gaaacgatcaataaactcaatcgcatcagtcgacaaatcctgcaagaaaccggaatagaa
gccacgcccgaagaactgggccgacggatggatatgccggaagaaaaagtcaggaaagtt
ttaaagatcgcaaaagaacctatttccatggaaacgcctattggcgaagatgaagattct
aacctcggtgattttattgaagacatcaacatggaatcacccgtggatttcgccacttcg
gccggcctcatggaagccacgcgagaaattttgtctacgcttaccccgcgcgaagccaaa
gtattgcggatgcgtttcggtatcgacatgaatactgatcacacgctggaagaagtaggc
aaacaattcgacgtcacgcgagagcggattcgccaaattgaagccaaagccttacgcaaa
ctgcgccaccccagccgcgctgaaaaattacacagtttcatagaagttgaggaataa
DBGET
integrated database retrieval system
