Coxiella burnetii Dugway 5J108-111: CBUD_1265
Help
Entry
CBUD_1265 CDS
T00583
Name
(GenBank) RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbd03016
]
CBUD_1265
Enzymes [BR:
cbd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CBUD_1265
Transfer RNA biogenesis [BR:
cbd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CBUD_1265
Prokaryotic type
tRNA splicing ligases
CBUD_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ABS77493
UniProt:
A9KFN2
LinkDB
All DBs
Position
complement(1246732..1248165)
Genome browser
AA seq
477 aa
AA seq
DB search
MMDIAQLKKINDYCWTLRESAGVSSPIQLYGSESLIREMDDKVLEQISNAAQLPGLVNAA
MTMPDAHWGYGFPIGGVAAFDPDQGGIISAGGVGFDISCGIRCLRTNLVWDEFKGFREAV
ADELYHRIPAGVGVGGFIKLTPSQLDEVLVDGAGWAIKRGFGIREDLSFVEENGQMKGAI
PDNVSELAKKRQRNEMGTLGSGNHYLEVQVVDKIYDKEAAQAYGLERDQVLISIHCGSRS
LGHQIGSDYLVALAKEASRLGVTLPDRELACAPIKSAEGQRYLGAMNAGINCALANRQLL
THLTREAFGKIIPSVFIETLYDVSHNTCKQEEHLINGQKRRLYIHRKGATRAFGPGNPNL
PAPYRTVGQPVIIGGSMGTGSYLLAGNPETENHAFASASHGAGRLMSRRQASKKWSGRQL
MDDLASEGIIIRSRTMRGVAEEAPGAYKDVDEVAESTEKAGLARRVVFLKPKICVKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgatggatatcgcccaattaaagaaaattaatgactattgctggacgctgcgggagtct
gcgggcgtatcttcgcctatccaattatatggaagcgagtccttaatccgagaaatggac
gataaagtccttgaacaaattagcaatgcggctcagttacctggcctagtgaacgcagcg
atgaccatgccggacgcgcattggggttacggttttcccattggcggggtggctgcgttt
gatcctgatcagggaggaattatttcagcgggcggcgtgggtttcgatatttcctgtggc
atccgttgtttacgtaccaatctggtttgggatgagtttaaagggtttcgtgaagcagtg
gctgacgaactctaccatcgcattcccgctggcgttggcgtgggagggtttataaagctg
acgccttctcagttagatgaggtattggtggatggtgctggttgggccattaagcggggt
tttggaattcgcgaggatttatcctttgttgaagaaaatggccaaatgaagggagccata
cccgacaatgtttctgaactggctaaaaaacgccaacgcaatgaaatgggcactttgggt
tcggggaatcattatttggaagtgcaggtggttgataaaatttatgacaaagaagcggca
caggcgtatggattagagagagaccaagttttaatttctatccattgtgggtcacgcagt
cttgggcatcaaattggaagtgattatttagtagcattagcaaaagaagccagccgtttg
ggcgttacgcttccggatcgtgagttggcctgcgccccgattaagtcggctgaaggtcaa
cgataccttggcgcaatgaatgccggcatcaactgtgccttggcaaaccgccaactctta
acgcacttaacccgtgaagcctttgggaaaataattccgagtgtttttatagaaaccttg
tacgatgtttctcataacacttgtaagcaagaagaacacctcattaatggccaaaaacgg
cggctttatattcaccgtaaaggcgctactcgcgcttttgggccagggaatcctaatttg
cctgcgccttatcgaacggttggccagccagtgattatcggcgggagcatggggacaggc
tcctatctactggcggggaatcccgaaacggaaaatcacgctttcgcatcagccagccac
ggcgccggtcgattgatgagtcgtcgtcaagcatcgaaaaaatggagcgggcggcaactg
atggatgatttagcgagtgagggaattataattcgcagtcgcacaatgcgcggggttgcc
gaagaggcaccgggcgcttataaagatgttgatgaagttgcagaatcaactgaaaaagca
gggcttgcgcgccgtgttgtatttttaaagccaaagatttgtgtgaaaggttag
DBGET
integrated database retrieval system
