Coxiella burnetii Dugway 5J108-111: CBUD_1569
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Entry
CBUD_1569 CDS
T00583
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03410
Base excision repair
cbd03430
Mismatch repair
cbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBUD_1569 (recJ)
03430 Mismatch repair
CBUD_1569 (recJ)
03440 Homologous recombination
CBUD_1569 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbd03400
]
CBUD_1569 (recJ)
DNA repair and recombination proteins [BR:
cbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CBUD_1569 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CBUD_1569 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CBUD_1569 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
DNAP_B_exo_N
Motif
Other DBs
NCBI-ProteinID:
ABS77734
UniProt:
A9KCW2
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All DBs
Position
complement(1574462..1576186)
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AA seq
574 aa
AA seq
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MEKKIIRRVVPELQNGFKCLHPVLQRIYLARNVNSPDELTHELKNLLPYSSLLNIDKAVA
RLTQALKDQQQIIVIGDFDADGATSTALTVSALHAFGMENVSYLVPNRFAYGYGLTPEIV
DLASSRRPDLIITVDNGISSHAGVAHANQLGIDVIITDHHLQGETVPPAYAIVNPNCKDD
PFPSKCLAGVGVAFYLMLALRAELKKINWFERRGLECPNMAKFLDFVALGTIADIVPLDR
NNRILVHQGLRRIRAGQAHPGILALLEVSGRPREKLRATDLGFGIGPRLNAAGRLDDMSL
GVACLLADNLDAALDIAYRLDDLNKERRVIESQMQKEAFDAIDGLNLNNGLPPALCLYQE
EWHQGVVGLVASRVKERTHRPTIVFAKMNDSTLKGSARSVSGLHIRNVLEAIAIKHPGLV
TKFGGHAMAAGLSLPLERFDEFKEAFSREVNERLDEDDLQPRLVSDGELTSNELTLELAL
LMHEGGPWGQDFPEPLFDGRFKLINQRVVGQRHLKLILQVPDSNYYLDGIAFHADLEQWP
NFHCEYAHLAYRLDVNEFQGRRKLQLLVEHIRAC
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaaaaattatccgacgtgtagtaccagaattacaaaatgggtttaaatgtctt
caccccgttctgcaacgtatttacttggcgcgtaatgttaattcacccgacgaactaacg
catgaactaaaaaatttattgccttattcctctttattgaacatcgataaagccgtagca
cgattaacgcaagcattaaaagaccagcaacaaattatagtcattggtgattttgatgcg
gatggcgcaacaagcactgcgctcactgtcagtgcattgcacgcctttggtatggaaaat
gtttcttatttagtaccaaataggttcgcttatggttacggtttaacgccggaaattgtt
gatttggcttcgtcccgccgtcccgatttaattatcactgtagataacggtatttccagc
cacgcgggggtggctcatgcgaatcaattaggtattgatgtcattatcaccgaccatcat
ttgcagggggagacagtgccccccgcttacgccatcgttaatcccaattgcaaagatgac
ccttttcccagtaaatgtttagcaggcgttggagtggctttttacctcatgttggcattg
cgcgcggaacttaaaaaaataaattggtttgagcggcgcggattggaatgtcccaatatg
gcaaaatttctcgattttgttgcgttgggcacgattgctgacattgtgcctcttgataga
aataatcgaattttagtgcatcaaggtttacggcgtattcgcgccggccaagcgcatccc
ggtattttagcgctattagaagtgtcagggcgtcctcgcgaaaaactgagggcgacggac
ttgggatttgggattgggcctcgattaaacgcggctggtcgtttagatgatatgagtttg
ggcgtagcgtgtttattagcagacaatctagatgctgcattggatatcgcttatcgcttg
gatgatttaaataaagaacggcgagtgatcgaatcgcaaatgcaaaaagaagcttttgac
gccatcgatggattaaatttgaataatggactgccacctgctttgtgtttatatcaagaa
gaatggcatcaaggtgtagttggcttagtagcttcgcgcgttaaagagcgcacccatcgg
cccactattgtttttgcgaaaatgaacgatagcactctcaaaggttctgctcgttcagtt
tcagggttacatatccgcaatgtgttagaagcgattgctatcaaacatccgggattagta
actaaattcggcgggcatgcgatggcggctggtttgagtttgccgctcgaacgttttgat
gagtttaaagaagcgttctctcgcgaggtgaacgagcgtttagacgaggacgaccttcag
cctcggttagtgagcgacggcgaattgacttccaatgagcttacgcttgagttggcgttg
ttaatgcacgagggcggaccttggggtcaagactttcctgagccactttttgatgggcga
tttaaattgatcaatcaacgcgttgtgggacaacgtcatttaaaattgattttacaagta
ccagacagtaattattatctggatggtatcgcttttcatgcggatcttgagcagtggccc
aattttcattgtgaatacgcgcatcttgcttatcggttggatgttaacgagttccaaggt
cgtcggaaattgcaactgcttgtagaacacatcagggcttgttga
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