Coxiella burnetii Dugway 5J108-111: CBUD_1590
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Entry
CBUD_1590 CDS
T00583
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBUD_1590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbd03019
]
CBUD_1590
03009 Ribosome biogenesis [BR:
cbd03009
]
CBUD_1590
Enzymes [BR:
cbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CBUD_1590
Messenger RNA biogenesis [BR:
cbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CBUD_1590
Ribosome biogenesis [BR:
cbd03009
]
Prokaryotic type
rRNA processing factors
CBUD_1590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Thermo-DBP
Motif
Other DBs
NCBI-ProteinID:
ABS77219
UniProt:
A9KEA8
LinkDB
All DBs
Position
1594627..1596789
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AA seq
720 aa
AA seq
DB search
MKRMLINATQPDEVRVAITDDSKLIDLDIEIPGQEQKKSNIYKGIITSIEPSLGAVFVNY
GSERHGFLPLKEISREYFLQDIEGDFDSIDINRVLKLGQELVVQVDKEERGTKGAALTTF
ISLAGSFLVLMPNNPRAGGISRRIEGDERDQLRETINQLSLPEGMGLIVRTAGLGRPKEE
LEWDLKILLRYWEAVKQAAVAKPGPYLIHQESDVIIRAIRDYLRQDVEEILIDDEVAFEN
ARHYINQVRPQFVERLKLYREHLPLFSRFQIEQQIENAHQREIRLPSGGSLIIDHSEALI
AIDINSARATRGASIEETALSTNLEAAEEIARQLRIRDIGGLIVIDFIDMTPLRNQREVE
NCLRNALSQDRARIQIGRISRFGLLEMSRQRLRSSLTRSTQIACPRCNAEGTIRSIESLG
LSIIHIIQEQASKAKNIHFQLQAPVDLATYLINEKRELLRDIEHHYPVKITIVPNQYMET
PLYQLRQIKIDPASLEHGKGMASYKLTKVFKTEAPQKQEIRALSEPAIQQFLTSPPAPTT
PRKTPTPGLFKRLMGKMFGSEEEPSTAVTPPVKPHVPERHKPSSPPRGRRQGGYASRKST
GPRRHHPRSGGGGGGHGQNRHGARSRRGTRGGRRDHGGGRGGPGYHTQSTGPMPPLGEDV
VDVNQLPMSTPPSPPPPFLTDADVPPSRDERRSGGINGDADHGAKPHPNGKVSDDNRGNR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgccactcagcctgatgaggtgcgcgtagctattactgac
gactctaaattaattgatctcgacatagaaattcccggtcaagagcagaaaaaatccaat
atttacaaaggcatcattaccagcattgagccaagtctcggtgcggtgtttgttaattat
ggcagcgaacgccacgggtttttgccgctgaaagaaatctcccgggaatattttctccag
gacatcgaaggcgattttgattctattgacatcaatcgggtgcttaaactaggtcaagaa
ctggtcgttcaagtagataaagaagagcgggggacgaaaggcgccgccttaacgacattt
attagtttggcgggttcttttttagtacttatgcccaacaatccccgagccggcggcatt
tcgcgccgcatcgaaggcgatgagcgcgatcaattgcgcgaaacgattaaccaacttagc
ctccctgaagggatgggcttgattgtccgaacggcaggattagggcggcctaaggaagaa
ttagaatgggatttaaaaattttactgcgctattgggaagcggttaaacaagccgctgtc
gctaaacccgggccttatttgattcaccaagaaagtgatgtcatcatccgggcgattcgc
gactacttgcgacaagacgtcgaagaaatccttatcgatgatgaagtggcctttgaaaat
gctcgacattacattaatcaagtccgtcctcaatttgtagaacggctaaaactttaccga
gaacatctcccgctcttcagtcgattccaaatcgaacaacagattgagaatgcgcaccaa
cgtgagattcgccttccttcgggaggttctttaattatcgatcacagcgaagctttgatc
gctattgatattaactccgctcgcgctacgcggggggcgagcatcgaagaaactgcgctt
tccaccaatttagaagccgcggaagagatcgctcgccaattgcgcattcgtgacattggc
ggtctgattgttatcgactttatcgacatgaccccgcttcgcaatcaacgcgaagtcgaa
aattgtctgcgcaacgcattaagccaagaccgagctcgtatccagattgggcgtatctcc
cgatttggtttgttggaaatgtctcgccaacgcttgcgatcttcgctcacacgttccact
caaatcgcctgcccccgatgcaacgccgaaggtacaatacgtagcattgaatcattggga
ttatccattatccacatcatccaagagcaagcttccaaagccaaaaatatccatttccaa
ttacaagcgccggttgatttagcgacttacctcattaatgaaaaacgggaattattacgg
gacattgaacaccattacccggtaaaaattaccatcgttcccaatcaatatatggaaacc
ccgctttatcaattacggcaaattaaaatcgaccctgccagtctcgaacacggtaaaggc
atggccagctacaaactcactaaagtgttcaaaacagaggcgccacaaaaacaagaaatc
agagccttgagtgagcctgccatccagcagtttttaacgtcgcctccggcgccaacaacg
cctcgtaaaacgcctacccccggcttattcaaacggttaatgggtaaaatgtttgggagt
gaagaagaaccttcaacggccgtgacgcccccggttaaaccccacgtgcctgaacggcac
aagccgtcttcccccccaaggggtcgaaggcaaggcggctacgcttcgcgcaaatcgaca
gggcccaggcgacatcatcctcgcagcggtggcggtggcggcggccatgggcaaaaccga
cacggggctcgctcacgccgcggaacgcgaggcggtcgccgtgatcacggcggagggcgg
ggcggccccggctatcatacgcaatcgacaggaccgatgcccccgctgggagaagacgtt
gtagatgtaaaccagctccctatgtctacaccgccatcgccaccaccaccttttctcaca
gacgccgacgtcccgccttctcgggatgagcgccgctctggcggcattaatggagatgcg
gatcacggtgctaaacctcatcctaatggtaaagtgagcgacgataatagaggcaatcgg
taa
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