Coxiella burnetii Dugway 5J108-111: CBUD_1604
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Entry
CBUD_1604 CDS
T00583
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBUD_1604 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbd03019
]
CBUD_1604 (recQ)
03400 DNA repair and recombination proteins [BR:
cbd03400
]
CBUD_1604 (recQ)
Enzymes [BR:
cbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBUD_1604 (recQ)
Messenger RNA biogenesis [BR:
cbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBUD_1604 (recQ)
DNA repair and recombination proteins [BR:
cbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBUD_1604 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
ABS77159
UniProt:
A9KEC2
LinkDB
All DBs
Position
complement(1606306..1608111)
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AA seq
601 aa
AA seq
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MSIKALEVLRQTFGYENFRPLQEKIINSVIAGEDNFVLMPTGGGKSLCYQIPALVREGVG
IVVSPLISLMQDQVQALNANGAAAALYNSTLTEAEARKNLARLHNNELDLLYIAPERLMT
ESFLSRLREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFNALTATADKQT
RQDILQRLRLTKANVHIASFNRPNIHYTLLEKQKPYNQLVNFLKDRKADFGIVYCLSRNR
VEEVAAKLQADRYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFV
VHYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIAVIKSFIENGNNEIRKRIELHKL
NCMSAFAEARTCRRRVLLNYFNESLTEDCGNCDICLNPPETYNGTIEAQKALSCVYRVRE
RYGVNYVIDVLRGKDDPRIKRAGHDRLSTYGIGKELSQNEWYSVFRQLIHLGYLEQDLAN
YSILRLTPLAHSILRGKETLILAKPREKYNVLKKKYKAAKANSSASPYDAALFEKLRELR
KAIARESRVAPFIIFSDASLVEMASRLPVSDSEFLAINGVGQKKLENYGKLFLHLIREHQ
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaaagcgcttgaagttttaagacaaacttttggatatgagaatttccgtccc
ctgcaagaaaaaatcattaacagtgttatagccggtgaagataattttgttctgatgcca
acgggcggcggaaagtcgttgtgttatcaaatacctgcgctcgtgcgagaaggggtgggt
attgtcgtttcgccactcatttccttaatgcaggatcaagttcaagctttaaatgccaac
ggagcggcggcggctctttataattctacgttgacggaagccgaagcgcgaaaaaattta
gcccggctgcataataatgaattggatttactttatatcgctcctgagcggttaatgact
gaatcatttctatcgcgcttaagggaagtgaaattagccttagtggctatcgatgaggct
cactgtgtttcgcagtggggtcatgattttcgaccggaatatttacggttgggtgagtta
cgcgaatattttccaaaagttccgttcaacgcactcaccgccacggcggataagcaaact
cgacaagacattttacaacgtttgcgattaacaaaggcgaatgtccacatcgccagcttt
aatcgtccaaatatccattatacattgttagaaaaacaaaaaccatacaaccaattagtc
aactttttaaaagatcgaaaagctgattttggtattgtttattgtttgagtcgcaaccga
gtggaggaagttgctgctaaattgcaagcggataggtactccgctttgccctatcacgct
gggttgcctgcggctcagcgcggaaaaacccaagaagcctttcagcgtgatgatgttaac
atcattgtggcgactattgcttttggaatgggaattgacaaacccaatgttcgtttcgtg
gtgcattatgatttgccaaagcatattgagggttattatcaggaaactggccgagctggg
cgagatggccttccttcggaagcattattgctttacggtttgcgtgatatcgctgttatc
aaaagttttattgaaaatggaaataatgagatccgcaaacggatcgaattgcataaatta
aattgcatgtctgcttttgcagaagcgcggacttgccgccgtcgtgtattgttaaactat
tttaatgaatcgttgactgaagattgcggtaattgcgatatttgtttaaatcctcctgaa
acctacaatggcaccattgaagcgcaaaaggcattgtcctgtgtctaccgtgtccgagaa
cgttatggcgttaactacgtcatcgatgtgcttcgtggtaaggatgatccacgaattaag
cgggccggccatgatcgtttatccacctatggcattggtaaggaattaagccagaacgaa
tggtatagcgtttttcgtcaattaattcacctgggttatctggaacaggatttggctaac
tattccattttgcgattaacaccgttggctcattcgattttgcgagggaaggaaacactc
attcttgctaaaccgcgcgagaaatataatgttttaaagaaaaaatacaaagcggcgaaa
gcaaattcatcggcatcgccttatgatgccgcactctttgagaagcttcgtgagttacgt
aaagcgattgcacgagaatctcgagttgctcctttcatcattttcagcgacgcatcgctg
gttgaaatggcgagccgtttacctgttagcgacagtgagtttctagccatcaacggtgtg
gggcaaaagaaattggaaaattacggcaagctatttcttcacttaattagggagcatcag
caataa
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