Coxiella burnetii Dugway 5J108-111: CBUD_1862
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Entry
CBUD_1862 CDS
T00583
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBUD_1862 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbd03021
]
CBUD_1862 (rpoB)
03400 DNA repair and recombination proteins [BR:
cbd03400
]
CBUD_1862 (rpoB)
Enzymes [BR:
cbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBUD_1862 (rpoB)
Transcription machinery [BR:
cbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBUD_1862 (rpoB)
DNA repair and recombination proteins [BR:
cbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBUD_1862 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ABS77649
UniProt:
A9KD39
LinkDB
All DBs
Position
complement(1841325..1845458)
Genome browser
AA seq
1377 aa
AA seq
DB search
MYMAQANSRSRNSATISYPEKRRARVNLGKREVEILKTPYLLETQIESYRKFLQKDIAAE
KREDNGLHAAFKSVFPITSYSGYAVLEYVGYSLGGESTLFDVEECKLRGLTYAAPLKVNM
RLVIYDKEAPAGKKAIKDIKEQEVYMGEIPLMTETGSLVINGTERVVVSQLHRSPGVFFE
HDKGKTHSSGKLLYSARVIPYRGSWLDFEFDPKDCLFVRIDRRRKLPATVILRALGYDTE
QILDMFYKTNHFHLNQETVTLDLIPQRLRGELAVVEIKDKKGKVIVEANRRISARHIRLI
EKAEINKLELPDDYLYGKVIGKTIIDKETGEIIAHANEEITAELLKNLRATKTASLDTLY
INEIECGLYVSDTLRLDTTTNQLEALVEIYRIMRPGEPPTKEAAESLFENLFFSPERYSL
SAVGRMKFNRRVGRKELTGLDVLSKEDIVDVLRVLVDIRDGKGDVDDIDHLGNRRIRSVG
EMAENQFRVGLVRVERAVKDRLSLADVENLMPQDLVNAKPVSAAIKEFFGSSQLSQFMDQ
NNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLAV
FARANEYGFLETPYRKVVDRVVTDETEYLSAIEEGDYYIAQANTNVDEKGRLVDDLISCR
YKGEFTLTTPDKINYMDVSPRQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPTIRPET
PLVGTGMERTVAVDSGVTVIAKRSGVIDSVDASRIVVRVDRKETEDDDDIGVDIYNLTKF
TRSNQNTCINQHPIVEVGDKVQKGDVLADGPSTDIGELALGQNLLVAFMPWNGYNFEDSI
LISERLVEEDRFTTIHIQEFTCVARDTKLGPEEITSDIPNVGESALAKLDESGIVHIGAE
VNAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVTPGITGTVIGVRIFTR
EGVKKDERTLEIEKAELSKVEKDLNDELRVREDALFENLEKLLTGRVAAGGPNKLAKGTK
ITKSYLADLPRQKWFEIRLQDDAATKRLEASHEHFKELRETRDAKLKDSRQKLTQGGDLA
PGVIKIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIVPIEDMPYLEDGTPVDIVLNPLGV
PSRMNIGQVLETHLGWATKGLGKKIGEMIEKGADAKELRKSLKPIYDLSKTQRFDLEALE
DPEIVTLAKNLRKGVPISSPVFDGATEEEIKQLLKMADLPTSGQAALYDGRTGKKFDRSV
TVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVAGRTRMYKNIVDGDHRMDAGMPESFNVLVKEIRSLAIDIGLEND
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
gtgtacatggcgcaagcgaatagtagaagtaggaattcagctacgatttcttatcctgag
aaaagacgcgcgcgcgtcaatttagggaaacgcgaagtcgaaatattaaaaacgccttat
ttattagaaacacagatagaatcttatcgaaaatttttgcaaaaagatatcgccgcagaa
aaacgcgaagataacggtttgcacgctgcctttaaatctgttttccctattaccagctat
tctgggtacgcagtgcttgaatacgtaggttacagtttggggggagaatccacccttttc
gatgttgaggaatgtaaattacggggattgacctacgcggctcctttgaaagttaatatg
aggctggtcatttacgataaagaagcccctgccggtaaaaaagccatcaaagatattaaa
gagcaagaagtttacatgggcgaaattccattgatgacagagacgggcagtcttgtcatt
aacgggactgagcgcgtagtggtttcacagctccatcgttcccccggcgtcttttttgaa
catgacaaaggaaaaacgcattcatcaggaaaattattatattctgcccgcgtcattcct
tatcgtggttcgtggttggattttgaatttgatcctaaagattgtttatttgtgcgtatt
gatcgtcggcgaaagttgccggctacggttattttgcgcgcgcttggttatgataccgag
caaatcctcgatatgttttataaaaccaatcactttcatcttaaccaagaaaccgtcacc
ttagatttgattccgcagcggttacgaggcgagctggcggttgtcgaaatcaaagataaa
aaaggtaaagttatcgttgaagccaatcgtcgaatttcagcgcggcacattcgcctcatc
gaaaaagcagaaattaataaacttgaactgcccgacgattatttatatggcaaagtcatt
gggaaaaccattattgacaaagaaactggcgaaatcatcgcgcacgcgaatgaagaaatt
accgctgaattattaaaaaacttacgcgctacgaaaacggcgtcgctggataccttgtat
atcaacgaaatcgaatgcggtctgtacgtttctgatactttgcggttagataccacgacc
aaccaacttgaagcactcgtggaaatttatcgcattatgcgcccgggcgaaccacccaca
aaagaagcggcagaaagtttgtttgaaaatttattcttctcgccggagcgttatagctta
tcggcagtgggacggatgaaatttaatcgccgtgtagggcgtaaagaattaaccggattg
gatgttttatccaaagaagacattgttgatgtattgcgcgtattggtcgatattcgtgat
ggtaaaggggatgtcgatgatatcgatcatctgggaaatcgacgtatccgaagtgtgggt
gaaatggcggaaaatcaattccgcgtgggtcttgtgcgggtggagcgcgccgttaaagac
agactcagtttggccgacgtcgaaaacctcatgcctcaggatttagtaaacgctaaacct
gtttctgcagccattaaagaattttttggttcaagccaactatcgcaatttatggatcaa
aataatccgctctcagaaatcactcataaacgacgcgtatccgccttgggaccgggagga
ttaacgcgagaacgtgcggggtttgaagtacgtgacgtgcacgtgacacactatggccga
gtttgtcccattgaaacgcccgaaggtcctaatatcgggttaattaactctttagctgtt
tttgctcgggctaatgaatatggatttttagaaacgccttatcgtaaagtcgttgatcgt
gtagtgactgatgaaacggagtatttgtcagctattgaagaaggtgattattacattgcg
caagccaataccaatgtcgatgaaaaagggcggctagtcgatgatttaatttcctgtcgg
tataaaggagagtttactttaacgacacccgataagattaattatatggatgtgtcgccg
cgacaaatcgtttccgttgctgctgcgttaattccttttttggaacacgatgacgctaac
cgtgcattgatgggatcaaacatgcaacgccaagccgtgcccaccattcggccggaaacc
ccattagtgggaaccggtatggagcgtactgtagcagtggactcaggggtaacggtcatt
gctaagcgcagtggtgtcatcgactccgttgacgcttcgcgaatcgttgttcgcgtagac
cgaaaagaaacggaagacgatgatgacatcggtgtggatatctataacctaacgaaattt
actcgctctaatcagaatacctgcattaatcagcatcccattgtggaagtcggcgataaa
gtccaaaaaggagacgtattagcggatggcccctccaccgatatcggtgagttagcgctg
gggcaaaacttattagtcgcttttatgccgtggaacggatataacttcgaagattccatt
ttgatttctgagcgattggtggaagaagatcgttttaccaccatccatattcaggaattt
acctgtgtggcccgcgatactaaattagggccggaagaaatcacttcggatattcccaac
gtcggtgaaagtgcgttggcgaaattggatgagtccggcattgtccacatcggtgctgaa
gttaatgccggcgatattttagtcggtaaagtcactcctaaaggagaaacgcaacttaca
ccggaagaaaaattattgcgcgccattttcggtgaaaaagcttcagatgtaaaagatact
tcgttacgcgtaacgccggggattaccggaactgtcattggcgttcgtatctttactcgg
gaaggcgttaagaaagacgagcggacgttagaaatagaaaaagccgaattgtcgaaagtt
gaaaaagatctcaatgacgagctgcgggttcgggaagacgcgctgtttgaaaatttagaa
aaattgctgacgggacgcgttgctgcgggtggcccgaataaactcgctaagggaacgaaa
attacaaaaagttacttagcagatttaccccgacagaaatggtttgaaattcgtttgcaa
gacgatgctgccaccaagcggctcgaagcttctcacgagcattttaaagaattgcgtgaa
acgcgagatgctaaattaaaagactcacgacaaaaattaacgcaaggcggtgatttagcg
ccgggcgtcattaaaattgtgaaagtttatcttgctgtaaaacgacgcattcaacccggt
gataaaatggcagggcgtcacggtaataaaggcgtcatttccaccatcgtccctatcgaa
gacatgccctatttagaagatggaacgccggtggatatcgttcttaatcctttaggcgta
ccgtcgcggatgaacatcggtcaagtgctggaaactcatctgggttgggccacgaaggga
ttaggcaaaaaaattggtgaaatgattgaaaaaggtgcggacgccaaagagctgcgcaag
tcattgaaacccatttatgatttgagtaagacccagcgctttgatttagaggcattagag
gaccctgaaattgtgacgttggcgaaaaacttgcgaaaaggtgtgcccatttcctcgcct
gtattcgatggagcgaccgaggaagaaattaagcagctgctgaaaatggcagatcttccc
acgtccggccaagccgcattgtacgatggtcgaaccggcaaaaaattcgatcggtcggtt
accgtcggttacatgtacatgctgaagcttaaccatctagtcgatgataagatgcacgcg
cgctccacaggatcgtacagtttagtgacgcagcaacccctcggtgggaaggctcaattt
ggcggtcaacggttcggtgaaatggaagtgtgggccttggaagcctacggagcggcttat
acgttgcaggaaatgttgacggttaaatccgacgacgtagctggccgcacgcgcatgtac
aaaaacatcgtcgacggcgatcatcgaatggatgcaggtatgccggagtcatttaacgta
ttagtaaaagaaatccgttcgttggcgattgatattggtttggagaatgattga
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integrated database retrieval system
