Coxiella burnetii Dugway 5J108-111: CBUD_2149
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Entry
CBUD_2149 CDS
T00583
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03420
Nucleotide excision repair
cbd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBUD_2149 (uvrD)
03430 Mismatch repair
CBUD_2149 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbd03400
]
CBUD_2149 (uvrD)
Enzymes [BR:
cbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBUD_2149 (uvrD)
DNA repair and recombination proteins [BR:
cbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBUD_2149 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CBUD_2149 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
DUF7811
Motif
Other DBs
NCBI-ProteinID:
ABS78395
UniProt:
A9KDA5
LinkDB
All DBs
Position
2120194..2122365
Genome browser
AA seq
723 aa
AA seq
DB search
MSGMENLSLLESLNPPQKEAVTSPFDHVLVLAGAGSGKTRVLTHRIAWLIQQKNVSPYSI
LAVTFTNKAAYEMRGRIESMLGMPMGAMWVGTFHGLAHRLLRAHWKDAGLPQSFQILDTD
DQYRLIRRMQRNLNLEESQWPPKQTQWFINKQKEEGRRSHQVLDSDGSYFTETLVKVYKA
YEDVCRQSGLVDFAELLLRTLELLRDSATLREHYQQRFQHILVDEFQDTNTIQYAWLKAL
AGEQTVFMAVGDDDQSIYSWRGAKIENIHHFSRDFAGVKTIRLEQNYRSTQTILDAANAV
IDNNKNRFGKKLWTDSRTGEPITLYTAFNERDEAFYVISCIDAWVRQGHSYNDVAILYRS
NAQSRLFEECLIDRQIPYRIYGGLKFFERAEIKDALAYLRLMANRNDDAAFERVVNVPTR
GIGNTTLVVLRTTARDHAVSLWQATQHLITNQTLNARALNALQHFIELVDRLQDETKNLP
LAEQTEKMLMGSGLLDLYKKDNSEKGLSRVENLEELINATSQFTPTDDLALSPLDAFLSH
VALETGEEQASAHSDCVSLMTLHAAKGLEFPLVIISGLEEDLFPHRMSIDAANGLEEERR
LCYVGMTRAREKLILTYTESRRLHGLEKFNQPSRFIQEIPPELIDAVRPTPKIARPVTIT
STQKSLVGETGYYVGQRVSHKKFGPGIIINYEGHSEHARLQVKFDYHGTKWLVASYAKLE
ALT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatggaaaatttgagtctgttggaatcgctaaatccgccgcaaaaagaagcg
gttacgtcaccctttgaccatgtgttggtattggccggcgcaggtagtgggaagacgcgg
gtgttaacgcaccgtattgcttggctgatccaacaaaaaaatgtttcgccttacagcatt
ctggccgtgacgtttaccaataaagcggcgtatgagatgcggggacggattgagtcgatg
ctgggtatgccgatgggtgcgatgtgggtagggacctttcatggtttagcacaccgattg
ctccgcgctcactggaaagacgctggattgccgcagtcgtttcaaattctcgatacggat
gatcaatatcgccttatccgtcgcatgcagcggaatctcaatttagaagagtctcaatgg
ccaccgaaacaaacccagtggtttattaacaaacaaaaagaagaaggacggcgttcgcat
caagttctcgatagcgatggcagttattttacggaaacgttagtcaaagtgtataaagcc
tatgaagatgtttgtcgccaaagcgggcttgtggattttgcggaattattattacggacg
ttagaattgttgcgcgattcggccacgcttcgcgaacattatcagcagcgatttcagcat
attttggtagatgaatttcaagataccaataccattcaatacgcttggttaaaagcgcta
gcaggcgagcagaccgttttcatggcggtgggcgatgatgatcaatcgatctatagctgg
cgcggtgcaaagattgaaaacatccatcatttttcgcgcgattttgctggtgtgaaaacc
atccgtttagaacaaaattaccgttcaacgcagacgattctcgatgccgccaatgcggtt
atcgataacaataaaaatcgcttcggaaaaaaattgtggacagacagccgcactggcgaa
cccatcactttatacacggcgtttaatgagcgcgacgaagctttttatgtaatttcttgt
attgacgcgtgggtgcgtcagggccactcttataacgacgtcgctattctttatcgttcg
aatgcacaatctcgtttattcgaagaatgcctgattgatcggcaaattccgtatcgtatt
tacggtggcttaaagttttttgagcgcgctgaaattaaagacgcgttggcatatttgcga
ctgatggccaatcgaaacgacgacgccgcttttgaacgcgtggtgaatgtcccaacgcgt
ggcatcgggaatacaacgcttgtggtattgcgcacaactgcccgcgatcacgctgtttcc
ctttggcaagccactcagcatttaattaccaatcagacattgaatgcgcgcgcgctcaac
gcgttacagcacttcatagaattagttgaccgattgcaagatgaaaccaaaaatctaccg
ctagcggaacaaaccgaaaaaatgctgatgggaagcggtttactggatttgtataaaaaa
gataatagtgaaaaaggactttcgcgcgttgagaatttagaagaattgattaatgcgacc
tctcaattcacaccaacggacgatttagctttatcgccattggatgcttttctttctcac
gtcgcgttggaaaccggcgaagaacaagcaagcgcgcacagcgattgtgtgagtttaatg
acactacatgcggcgaaaggtttggaatttccattagtgattattagtggtttggaagag
gatttatttccgcatcgtatgtctatcgatgctgctaacggtttagaagaagaacgtcgc
ttgtgttacgttggcatgacgcgtgcgcgggaaaaattaattttgacgtatactgaaagc
cgccgtctgcatggtttggaaaaattcaatcagccgtcccgatttattcaggaaattcca
ccggaattaatcgatgccgttcgccccactcctaaaatagcgcgtcctgttacaatcact
tctactcaaaaatctctggtgggtgagacgggttattacgtcgggcagcgtgtgagtcat
aaaaaattcgggccgggcattattattaattacgaaggtcatagcgaacatgcgcgtttg
caagtgaaattcgattaccacggcacgaaatggctggtcgctagctatgccaaactggaa
gccctaacgtga
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