Clostridium beijerinckii NCIMB 8052: Cbei_0103
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Entry
Cbei_0103 CDS
T00547
Name
(GenBank) putative TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbe03016
]
Cbei_0103
Transfer RNA biogenesis [BR:
cbe03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Cbei_0103
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Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
His_biosynth
IGPS
NMO
FMN_dh
SOR_SNZ
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
ABR32293
UniProt:
A6LPL3
LinkDB
All DBs
Position
132946..133911
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AA seq
321 aa
AA seq
DB search
MKIGNLTFENNIFLAPMAGVTDISFRGLCKEMGCGLVYTEMVSAKALYYGSENTQTLLRI
ADEEKPVAAQIFGREPDVMARICEEYLNNRKDICIIDINMGCPAPKIVKNGEGSALMKEP
ELAYDIVRTIKKVSTKPVTVKFRKGFDEDNINAVEFAKGMEQAGADAIAVHGRTRKQMYQ
GKADWDIIKRVKDSVSIPVIGNGDVFSPEDAIRMKRTTNCDGIMIARGSQGNPWIFRQIN
NLLNGEVIQEVSDNEKIEMCIRHYELAIKYDGEFKAIREMRKHASWYIKGLPRCTELKNK
INTINDSEKVIEALRKYQDEL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagggaatttaacctttgaaaacaatatatttctagcacctatggcaggagta
actgacatatcatttagaggattatgtaaggaaatgggatgcggtttggtttacaccgaa
atggttagtgctaaggcattatattatggaagcgagaatacacaaaccttacttagaata
gcagatgaagaaaaaccagttgcggcccagatatttggtagagagccagatgtgatggct
agaatttgtgaggaatatttaaataacaggaaagatatttgtataattgatattaatatg
ggatgcccagctcccaaaatagttaaaaatggagagggatctgcattaatgaaagaaccg
gaacttgcatacgatatcgttagaactataaaaaaagtttcaaccaaacctgttactgtc
aagtttagaaaaggatttgatgaagataatattaatgcagtagaatttgcaaaagggatg
gaacaagctggagcagatgctattgctgttcatggacgaacacgaaaacaaatgtatcaa
gggaaagcagattgggacataataaagagagttaaggacagtgtttcaattcctgtaata
ggaaatggagatgtattttctccagaagatgctatcagaatgaaaagaactacaaattgt
gatggaataatgattgcaagaggaagtcaagggaatccatggatatttagacagataaat
aatttgcttaatggagaagtaattcaagaagtttcagataatgaaaaaattgaaatgtgc
attaggcattacgaattagcaataaaatatgatggggaatttaaagcgataagagaaatg
agaaaacacgcatcatggtatattaaagggcttccaagatgcacagaacttaaaaataag
attaatactataaatgatagtgaaaaagttattgaagctttaagaaagtatcaagatgaa
ttatag
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