Clostridium beijerinckii NCIMB 8052: Cbei_0516
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Entry
Cbei_0516 CDS
T00547
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbe03009
]
Cbei_0516
Enzymes [BR:
cbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Cbei_0516
Ribosome biogenesis [BR:
cbe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cbei_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
ABR32704
UniProt:
A6LQS4
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All DBs
Position
621712..622611
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AA seq
299 aa
AA seq
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MSILEKQVVNIEKGTKIREYLKVELGLSTRLIRSASLGKRIFVNDEVVKMNRVLNEGEII
KIDLAKDESQDIAPEKMDIDIVYEDEDILVVNKKPFMVVHPTKSYQSGTLANGVINYFME
SGQNCIVRLVSRLDMNTSGLIIIAKNQFSHGMLSKEMSENKVEKKYLALVHGIMKEKQGT
IDLPIYKPEGIENGIRRVVDERGQRSITHYKVVEEYNESSLVECKLETGRTHQIRVHLSH
LGHPIYGDTLYGDGDEEDLIKRQALHAFGLDFKSPRSGEILSLRAELPDDMKELISKLK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttagaaaaacaggttgttaacatagagaagggcactaaaataagagaatat
ttgaaagtggaacttggcttatcaacaagattaattagaagtgcatctcttggtaaaaga
atatttgttaatgatgaagttgtaaaaatgaatagagttctaaatgagggagaaattatt
aaaattgatctggcaaaagatgaaagtcaggatatagctccagaaaaaatggatatagat
atagtttatgaagatgaagatattttagtagtcaacaagaaaccttttatggtggtgcat
ccaactaaaagttatcaaagcgggactcttgcaaatggagtaatcaattattttatggag
agcggtcaaaattgtatagttagattagtttctagattagatatgaatacatcaggtctt
attataattgctaaaaatcagttttctcatggaatgctatctaaagaaatgagtgaaaat
aaggtagaaaaaaaatatttagcattagttcatggaattatgaaagaaaaacaggggaca
attgatctaccaatatataaacctgaaggaattgaaaatggcattaggagagttgttgat
gagagaggccaaaggagcataacccactataaagttgttgaagaatacaatgaatcaagt
ttagtagaatgcaaacttgagactggaagaacccatcaaattagagtgcatttgagtcac
ttgggtcatcctatttacggtgatacattatatggagatggggatgaagaagatttaata
aaaaggcaggctcttcatgcatttggattagattttaaatctccaaggagtggtgaaata
ctttcattaagagcagaacttccagatgatatgaaagaattaattagtaaattgaaataa
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