Clostridium beijerinckii NCIMB 8052: Cbei_0552
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Entry
Cbei_0552 CDS
T00547
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cbei_0552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbe03400
]
Cbei_0552
Enzymes [BR:
cbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Cbei_0552
DNA repair and recombination proteins [BR:
cbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Cbei_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ABR32739
UniProt:
A6LQV9
LinkDB
All DBs
Position
661750..662583
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AA seq
277 aa
AA seq
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MLKIGCHLSASKGFKNMGEEAISIGGNTFQFFTRNPRGSKAKTIDETDIKEFLKLAEENN
FSKILGHAPYTLNACSADENTRNFAVEIMKDDLERMEYIPNNLYNFHPGSHVKQGVEIGI
KYISDMLNTVLKPEQTTTVLLETMAGKGTEIGRTFDELKEILNNVELSHKVGVCLDTCHV
HDAGYDIVNNLDKVVEQFDKIIGLDKLCAIHLNDSMNPFGSHKDRHQKIGEGSIGLEGIK
NIINHPMLCNLPFFLETPNELDGYAREIKLLKSIYQN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagataggttgccatttatcggcttcaaaaggattcaagaatatgggagaagag
gctattagtataggcggaaatacatttcaattttttactagaaatccaagaggtagtaaa
gcaaagactatagatgaaacagatataaaagaatttttaaagttagcagaagaaaataat
ttctctaaaatattaggtcatgcaccatatacattaaatgcttgctctgcagatgagaac
acaagaaattttgcagtagagataatgaaggatgatttagaaaggatggagtatattcct
aataatctttataattttcatccaggcagtcatgttaagcaaggtgtggagattggaatt
aaatatatttcagatatgctaaatacagttcttaagccagaacaaacaactactgtattg
ctcgaaacaatggcaggaaagggcacagaaattggacgcacatttgatgaattaaaagag
attttaaataatgtagaattatcacataaagtaggtgtttgtcttgatacatgtcatgtc
catgatgcagggtatgatattgttaataatttagataaagtagtggaacaatttgataag
ataattgggttagataaattatgtgcaatacatttaaatgatagtatgaatccatttgga
agtcataaagacaggcatcaaaaaataggagaaggttctattggattagagggaattaag
aatattattaatcatccaatgttgtgcaatttaccatttttccttgagacaccaaatgag
cttgacggatatgcaagggaaataaaattattaaagagtatataccaaaattaa
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