Clostridium beijerinckii NCIMB 8052: Cbei_1208
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Entry
Cbei_1208 CDS
T00547
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cbei_1208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbe03019
]
Cbei_1208
03016 Transfer RNA biogenesis [BR:
cbe03016
]
Cbei_1208
Enzymes [BR:
cbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cbei_1208
Messenger RNA biogenesis [BR:
cbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cbei_1208
Transfer RNA biogenesis [BR:
cbe03016
]
Prokaryotic type
tRNA degradation factors
Cbei_1208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
S1_RRP5
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
ABR33390
UniProt:
A6LSR0
LinkDB
All DBs
Position
1428614..1430719
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AA seq
701 aa
AA seq
DB search
MNNVLTTEIAGRELKVEFGKVGMLSNAATFTSYGDTVILTNVNASEQPREGIDFFPLSVE
YEERLYAVGKIPGGFIKREGRPSEKAILNGRAVDRTLRPLFPKGYRNDVQVVTTVVSVEK
DNLPEILAINAASLALCLSSIPYTIPAAAVQVGIIDGKFVTNPDTQGREKSILHLTVCAT
KERVMMIEAGGQEIPEDTMIDAIKYGFDECQKIIAFQEEAVAKFGKKKDEPVLYAVDPEL
EKDVKEFASDMIKEAMYIMEKDERNAAVDAVYEKVNEAFGEKYADKMGDIKEVLYTMQKK
VVRHMLLKDKRRPDGRAFDQIRPLGCEIGILPRTHGTGLFTRGLTQVMTVATLGSISEIQ
ILDGIDEAQSKRYMHHYNFPGYSVGEVKPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSEDLSEEAVLTDI
QGIEDFFGDMDFKVAGTTEGITSIQVDTKLQGFSFNVVENAIRDARKARLTIIDKINECI
STPKEDVSLYAPKTQIMSINPDKIRDVIGAGGKVINKIIQDTGVKIDIKEDGTVFVSSTD
HNGVNEAIKIIEGLTKEVKAGEVYLGKVTKITTFGAFVEILPSKEGLVHISKLAKERVNK
VEDVVSIGDEILVKVTEIDNQGRINLSRKDALVEQENKEEK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgttctaacgactgaaatcgctggaagagaattgaaagttgagttcggaaaa
gtaggtatgttatcaaatgcagcaacatttactagctatggagacacagtaattttaact
aatgttaatgcatcagagcagccaagagaaggaattgatttctttcctctaagtgttgaa
tatgaagaaagattatatgcagtaggtaaaattccaggtggatttatcaagagagaagga
agaccatcagaaaaagctatattaaatggtagagctgttgatagaactctaagacctcta
tttccaaagggatacagaaatgacgttcaagttgttactacagttgtatccgtagaaaaa
gataatttgccagaaatcttagcaattaatgcagcatcgcttgcattatgcctttcaagt
attccttatacaattccagctgcagcagttcaagtaggaattatcgatggtaaattcgtt
acaaatccagatactcaaggtcgtgaaaaaagcattcttcatttaacagtatgcgctaca
aaagaaagagtaatgatgattgaagctggtggacaggagataccagaagatactatgata
gacgctattaaatatggttttgatgagtgtcaaaagattattgcattccaagaagaagca
gtagctaagtttggaaagaaaaaagatgaaccagtattatatgctgtagatccagaactt
gaaaaagatgttaaagaatttgcatctgacatgattaaagaagcaatgtatatcatggaa
aaagatgaaagaaatgctgctgttgatgcagtttatgaaaaagttaatgaagcatttggt
gaaaaatatgctgataaaatgggcgatattaaggaagttctttacactatgcaaaagaaa
gttgtaagacacatgcttctaaaagataagagaaggccagatggaagagcatttgatcaa
atcagaccattaggatgtgaaataggaattttacctagaacacacggtacaggattattc
acaagaggattaactcaagtaatgacagttgcaactcttggctcaattagcgagattcaa
attctagatggaatagatgaagctcaatcaaaacgatatatgcatcattataatttccca
ggatacagtgttggagaagtaaaacctttaagaggtcctggtagacgtgaaataggtcat
ggagctttagcagaaagagctttagaaccattaatcccttccgaagaagaattcccatat
acaataagattagtatcagaagttttaagttctaatggttcaacttcacaagcatcagtt
tgtggttcgacattagcattattagatgcaggtgtaccaattaaaagaccagcagctggt
attgcaatgggattaataacttcagaagatttaagtgaagaagcagtattaactgatatt
caaggaatagaagatttctttggagatatggattttaaggtagctggaacaacagaaggt
ataacatctattcaagtagatactaagcttcaaggttttagttttaatgtagtagaaaat
gctataagagatgctagaaaagctagacttactataattgataaaataaacgaatgtatt
tctacacctaaagaagatgtttcattatatgctccaaaaacacaaattatgagcataaat
cctgataagataagggatgtaataggagcaggtggtaaggttataaataaaattatacaa
gatacaggagttaagatagatataaaagaagatggaactgtatttgtaagctcaactgat
cataatggtgttaatgaagccataaagataatagaaggattaactaaagaagttaaagct
ggagaagtttatcttggaaaagttactaaaataactacatttggagcttttgttgagatt
ttaccaagtaaagaaggattagttcatatttctaagctagctaaggaaagagtgaacaaa
gtagaagatgtagtatctattggagatgagattttagttaaggttacagaaattgataac
caaggcagaataaatctttcaagaaaagatgctttagtagaacaagaaaataaggaagag
aaataa
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