Clostridium beijerinckii NCIMB 8052: Cbei_1339
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Entry
Cbei_1339 CDS
T00547
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03420
Nucleotide excision repair
cbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cbei_1339
03430 Mismatch repair
Cbei_1339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbe03400
]
Cbei_1339
Enzymes [BR:
cbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cbei_1339
DNA repair and recombination proteins [BR:
cbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cbei_1339
MMR (mismatch excision repair)
Other MMR factors
Cbei_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
ResIII
AAA_30
DEAD
CarD_TRCF_RID
AAA_11
GvpD_P-loop
AAA_16
PcrA_UvrD_tudor
AAA_7
nSTAND3
Imm71
Motif
Other DBs
NCBI-ProteinID:
ABR33519
UniProt:
A6LT39
LinkDB
All DBs
Position
1577394..1579409
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AA seq
671 aa
AA seq
DB search
MGYDLDKYQMDAVKAEEKNVLIVAAPGSGKTTVIINRVDYLVKHKRVANGNIIVITFTKA
AAQNMKNRYVSKFNTNSSPFFGTFHGLFYKILLRCGRNIDIVDGAVVHKIVSNILGKYFD
EVNEDKIKEAINNISLYKTSRVPLNEFKPSIAKEIFEEALEKYEEYKKEHNKRDFDDLAI
EVLELLKNDKNMLLSYRKLFKYVLVDEFQDCDEMQIDFLRLINDGEDNNLFAVGDEDQCI
YSFRGSKPEYMVNFDKIFIGGKKYYLSINYRSRMNIVDKSKTVIAYNEKRNNKEIKWNKE
CEGIVKWFNPYNEKMQAESLTDIVINNKTLGINYEDNAVLYRTNIESMSVIDVLTKRKIP
FTLLDREYNFFEHFICRDLISYLRLSVDEFDRNSFLQIINRPFRYISKGNLFYIKNYDRE
ESPFTIIISKEDTPPFQKKKLDELRKDINYLNKISLSSAIAYIVMDLGYRDYLQKYANKF
NQSFEDLEDIIEEFKLSAEGYKTIFEFLEHIEEVKQSIEESKRKTKREGVILSTIHGVKG
MEFKNVYVINCVEETIPHASSIKENIEEERRLFYVGITRAIDNLYLFSPRSRKGQFKDVS
RFIIEGKLNDMPVDTYGYEIGNKVAHRTYGVGEITGFDENDKDKIKLKFDDGIFRSFSLK
ILVDNNLISKC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtggggtacgatcttgataaatatcagatggatgcagtaaaggcagaagaaaaaaatgtc
ttgatagttgcagcacctggatctggaaaaactacggttataataaatagagttgattat
ctagtaaagcataaaagagtagctaatggaaatataatagtaattacatttacaaaagcg
gcggcgcagaatatgaagaatagatatgtatctaaattcaatacgaacagttcacctttt
tttgggacattccatggcttattttataagatacttttgagatgtggaagaaatatcgac
atagtcgatggggccgttgttcacaaaatagttagtaatattttaggtaaatactttgat
gaagttaatgaagataaaattaaagaagcaataaataacatttctttgtataaaacttca
agagttcctctaaatgaatttaagccatcaattgcaaaagaaatttttgaagaagcattg
gaaaaatatgaagaatataaaaaagaacacaacaaaagagattttgacgatctagctata
gaagtattagaattgctaaagaatgataagaatatgttgttgtcttataggaaattattc
aagtatgttttagttgatgagtttcaagattgtgatgaaatgcaaatagattttttaagg
ttaataaatgatggggaagataataatctttttgcagtgggagatgaagatcaatgtatt
tattcttttagagggtcaaagccagagtatatggttaactttgataaaatatttataggt
gggaaaaaatattatttatctataaattatagaagtagaatgaatatagttgataaatca
aaaactgtaatagcgtataatgaaaagcgaaataataaagagataaaatggaataaagag
tgtgaggggattgttaagtggtttaatccatataatgaaaagatgcaggctgaaagtttg
actgatatagttataaataataaaactctaggaattaattatgaagataatgcagtattg
tatagaactaatatagagtctatgtctgttattgatgtattaactaaaagaaagatccca
tttacactacttgatagagaatataatttttttgagcattttatttgcagggatttaatc
tcatatttaagattaagcgtagatgaatttgatagaaatagcttcttgcaaataataaat
aggcctttcagatatataagtaagggaaatttattttatataaaaaattatgatagagaa
gagagtccatttactataattattagcaaagaagatacaccaccatttcaaaagaaaaag
cttgatgagttaagaaaagatataaactatttaaataagatatctttatcatcagcaatt
gcatatatagtaatggatctaggatatagagattatcttcagaaatatgctaataaattt
aatcaaagttttgaggatttagaagatataatagaagaatttaaattatcagcagaagga
tataaaactatatttgaatttctagaacatatagaggaagtaaaacaaagtatagaggaa
agtaaaagaaaaactaagagagaaggcgttatcttaagtactatacatggcgtgaaagga
atggagttcaaaaatgtctatgttataaattgtgtagaagaaactatacctcatgcatca
agtataaaggaaaatattgaggaagaacgaagattattttatgttggaataactagggca
atagataacctgtatctattttctccaagaagcaggaaaggccaatttaaggatgtttcg
aggtttattatcgaaggaaaattaaatgatatgcctgttgacacttatggatacgagatt
ggaaataaagtagcccatagaacttatggtgttggagagattactggatttgatgaaaat
gacaaagataagattaaattgaagtttgatgatggaatttttagaagtttttctttgaaa
attttggttgataacaatttaatatcaaaatgttaa
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