KEGG   Clostridium beijerinckii NCIMB 8052: Cbei_2015
Entry
Cbei_2015         CDS       T00547                                 
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
cbe  Clostridium beijerinckii NCIMB 8052
Brite
KEGG Orthology (KO) [BR:cbe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbe03400]
    Cbei_2015
Enzymes [BR:cbe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Cbei_2015
DNA repair and recombination proteins [BR:cbe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Cbei_2015
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII RNase_H_2 Rv2179c-like PhoH
Other DBs
NCBI-ProteinID: ABR34185
UniProt: A6LV05
LinkDB
Position
2341829..2344759
AA seq 976 aa
MLEDLISVLDNVIYLDIETTGLDETCSEIIEIGAVKVKNGVITTYNTLIRPRGRVPISIY
SLCSDLKEADLLSARSLNSIKQEVLEFLEDLPLICHNGNFERKFLSFYIPEIKNTIMDSM
ELAIILEPWRKEYNLNSLIKEITNLNKDELHRGLSDSIDTLKVVNSLLLRQWNREENSRK
KDKSLHNLIIKEYQYLQKWPWTKHLLKPPFFIDEGYTYVNYLENKEEELKLKKIPIDYLK
YEDLLENEEIWNNGGDFGYQYRKDQKEFAKKIRENFEKGERIFIEAPTGSGKTFAYVIIA
AIETYLNKQKNRKDDASFIISTNTKELQNQLIERDIPTILKKLRLDDKLNYGAMKGKGNY
LCIERINRCEEFQMDEKGNLALLFLRRLCESGNYGDIENINYLVQKHLELDKYIREVNCD
SEQCKLDKCTRACFLRKRYNELPEENITVINHSLLACWPYTEKKKINHIIIDEGHNLMEK
CYDFFAEEFSSAEFIQLLDLIEKGHPSIIAMLLTLNASFGYRETIEKDKIVYLANDIIVN
INILLNDFRSLRLISGEYNFTTEFFIPREDLQGITNAIGSEISVLKESIYPLYKMLNDYI
YNITLDDEIDGDIDHKNLSDYIAKLKSAFDVLDKFLESSVFYAKILEVDSEYKSFILKNV
PLNVGEMVNEHMLKDVKSTTFLSATLRIENSFNKIKKHLGQEKAKEFIIPPTFDLKKRTK
IFALKDVGRYDEPSYIKNVSKFIYNTALKINGHILVLFNNNARRTAVSEELELLTRGTKI
EVHMSKKSVRALNDKNRQVIILGSKGFFEGIDVPGDALSCVMLDKIPNYSPEYPILRAIT
TYQKKGYQDVNYPQVCIKAKQIYGRLIRSTFDYGYFIILDPGQNSYTIRNLERDLNGPSI
EFSSTTKVLSEMEFDYNNWRRNNINTIINNIKKSNKSIKEEFNNEAKKHKLFWELLKVEN
DMYYFENINFKLNGKI
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgctagaagatttaatcagtgttttagataatgtaatatatttagatatagaaacaact
ggacttgatgaaacatgctcagaaattatagaaattggagctgttaaagttaagaatgga
gttataactacttataatacattaataagaccaagaggacgcgtgccaataagtatttac
agtctctgcagtgatttaaaggaggcagatttactaagtgctagaagtttgaattcaata
aaacaagaagtactggaatttttagaagatttacctttaatatgtcataatggaaatttt
gaaagaaaatttttatctttttatattcctgaaataaaaaatacaataatggattccatg
gaacttgcaataattttagaaccatggagaaaagaatataatttaaattctttaattaaa
gaaattactaatttaaataaagatgaattacatagaggactatcagattcaatagacacc
ttaaaagtagttaattcactacttttaaggcaatggaatagagaagaaaatagcagaaaa
aaggataaatcgctacataatctaattattaaagaatatcagtatttacaaaaatggcca
tggactaagcatttattgaagcctccttttttcattgatgaaggttatacatatgtaaat
tacctagagaacaaagaagaggaacttaagctaaagaaaattcctatagattatttgaaa
tatgaagatttacttgaaaatgaagagatatggaacaatggtggggattttggataccag
tatagaaaagatcaaaaggaatttgcaaaaaagataagagaaaactttgaaaaaggtgag
agaatatttatagaggcaccaactggaagtggtaaaacttttgcgtatgtaataatagct
gctattgaaacatatttaaataagcagaaaaatagaaaagatgatgctagctttattata
tctacaaacacaaaggaattacaaaatcagcttattgagagagatattccgactatactt
aaaaaattaagattagatgataaattaaattatggtgctatgaaagggaaaggaaattat
ctttgcatagaaagaataaatagatgtgaagaatttcagatggatgaaaaaggaaatcta
gcattgctttttctaagaagactttgtgaaagcggtaattatggagatatagaaaatata
aattatctagtccaaaaacatttagaattggataagtacataagggaagttaattgtgat
agtgaacaatgtaagcttgataaatgtacaagggcttgttttttgaggaaaaggtataat
gagctgcctgaggaaaacatcacagttattaatcattctcttttagcatgctggccatat
actgaaaagaaaaaaattaaccacataattattgatgagggtcataacttaatggagaag
tgttatgatttttttgctgaggaattttcgtcagctgaatttatacaattgctagatctt
atagaaaaaggtcacccgagtattatagctatgcttttaactttaaatgccagctttggt
tatagggaaaccatagaaaaagataaaattgtgtatttagcaaatgatattatagtaaat
ataaatatattattaaatgattttagaagcctgagacttatcagcggagaatataatttt
actactgaatttttcatcccaagagaagatttacaaggaataacaaatgccatagggtct
gagatatcagttttgaaagaaagtatatatccactatataagatgttaaatgactatatt
tataatataactttagatgacgaaatagatggggatattgaccacaagaatttatccgat
tatatagcaaagcttaaaagtgcatttgatgttttagataagtttttagaaagctcagtg
ttctatgcaaaaatattagaagtagactcagaatataaatcattcatacttaaaaatgtt
cctttaaatgtaggagaaatggttaatgaacatatgttaaaagacgttaaaagtacgacg
ttcttatcggcaacattgagaatagaaaattcttttaataaaataaaaaagcatttagga
caggaaaaagcaaaggagtttataattccaccaacttttgatttaaagaaaagaactaaa
atctttgctttaaaagatgttgggaggtatgatgaaccatcatatataaaaaatgtttcc
aaatttatttataatactgcattaaaaataaatggtcatattcttgttttattcaataat
aatgcaaggagaactgctgtgagtgaagagcttgagctgcttactagaggaacaaaaata
gaagtacacatgagtaaaaaatcagtaagagctttaaatgataaaaataggcaagttata
atacttggaagcaagggcttttttgaggggatagatgtacctggagacgcattaagctgt
gttatgttagataaaattcctaactatagtccagaatatcctattttaagagcaattact
acataccagaagaaggggtatcaggatgtgaattatccgcaggtatgtattaaagctaag
caaatatatggtagacttattagaagcacttttgattatggatatttcataattttagat
ccagggcaaaactcatatactataagaaatcttgaaagagatttaaatgggccaagtata
gaattttcatcgactactaaagtgctttcagagatggagtttgattataataattggaga
agaaacaatattaatacaatcataaataacattaagaaaagtaataaaagcattaaagag
gaatttaacaatgaagcaaagaagcataaattattttgggaattactaaaagttgaaaat
gatatgtattattttgaaaacattaattttaaattaaatggtaagatttaa

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