Clostridium beijerinckii NCIMB 8052: Cbei_2180
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Entry
Cbei_2180 CDS
T00547
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbe03000
]
Cbei_2180
Transcription factors [BR:
cbe03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cbei_2180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
Mg_chelatase
AAA_2
AAA_3
PAS_8
HTH_30
AAA_16
PAS
PAS_7
AAA
DUF134
HTH_22
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABR34347
UniProt:
A6LVG7
LinkDB
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Position
2543783..2545747
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AA seq
654 aa
AA seq
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MENKELLIENSHKRSESYGVEKNSDHSNKILTGEELENILTINKELIEVSKIYIDMVFSA
VMDNEFIIVLTDKNGCILYIKGAEENNSKLGGNNLEVGAYMDEQNIGTNAMGTAIKEDRC
IQITATEHYIKRFHNLTCSAAPIHNTKGEIIGTLNLTGRRDMKHPHTLGLVVFGVKAIEN
ELDKKGIRDILNQTYNYMESVIDNVDKGIMIVNKEYKVININKLGVEIFNIDKDLIISQD
IHYILPDLGNVIEELENHNDDIIKELKLKHTSRHKIRLVFKGLKHKENIIGMVVTISYEK
EGKDNKNATGAFFTFNDIIGDSAAIVNVITNCKVIANSPSTVLIQGESGTGKEILAQAMH
NYSVRRRNKFVAINCGAIPANIIESELFGYEDGTFTGGKRGGNPGKFEIASGGTLFLDEI
GEMPIDAQVKLLRVLQNGRVTRLGGSREIPIDVRVIAATNKNLKREVQKGNFREDLYYRL
CVIPITLPPLRERKGDVKMLIDFFLRIKSFQLNKSIPEIDKSLYNKLLDYDWPGNIRELE
NYIENIVNLDGRSSFNLWEFEDNQSFETDKTYDRKILKDGFLNKEIWEDDQTNGLLKNVN
TEKTEYMVNTLNLEELEMKAIHEAVRINDHNMTKAAKTLGISRNTLYLKLKKHK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagaactattaattgaaaactcacataagagaagcgaaagttatggagtt
gaaaaaaattcagatcattcaaataagattcttactggtgaagaattagaaaatatatta
actattaataaagaattaatagaagtatctaaaatatacatagatatggtattttcagca
gttatggataatgaatttattatagtgttaacagataaaaatggatgcattctatatatt
aaaggagcagaagaaaataatagtaagcttggggggaataatcttgaagttggggcttat
atggacgaacaaaatataggcactaatgcaatgggaacagcaattaaagaagacaggtgt
attcagataactgcaactgagcattacataaaaaggtttcacaatttaacatgctctgct
gcacctattcataatacaaagggagaaattattggaacattgaacttaacaggtagaaga
gatatgaagcatccacatactttaggtttagttgtttttggtgtaaaggcaatcgaaaat
gaattggacaagaagggtatacgggatatattgaatcaaacctataactatatggagagc
gttatagataatgttgacaaaggtattatgatagtaaataaagagtataaagtaataaat
ataaataaacttggagtagagatatttaatatagataaggatttgataataagtcaagat
atacattatattttgcctgatttgggaaacgtaatagaagaacttgaaaaccataatgat
gatattataaaggaattaaaattaaagcatacaagcagacataaaataaggttggttttt
aaagggcttaaacataaagaaaatattataggtatggttgtaacaataagctatgaaaaa
gaaggaaaagacaacaaaaatgcaacaggggcattttttacttttaatgatataattggg
gatagtgcagccattgttaatgtgataactaactgtaaggttattgccaatagtccttca
actgttctaattcaaggagaaagtggaacaggtaaagaaatattagcacaggctatgcat
aattatagtgtaagaagaagaaataaatttgttgcaataaattgtggagctataccagct
aatataatagaaagtgaattatttgggtatgaggatgggacttttacaggaggaaaaaga
ggcggaaatccaggtaagtttgagattgcaagcggaggtactttgtttttggacgaaatc
ggggaaatgccaattgatgcacaggttaagctgttaagagtacttcaaaatggaagagtc
acaaggcttggtggaagcagagagattcctatagatgtaagagttatagcagctactaat
aaaaatttaaaaagagaagttcaaaaaggaaattttagagaagatttgtactatagatta
tgtgtaattccaatcactttaccgcctttaagagagagaaaaggcgatgtaaaaatgctt
attgacttcttcttaagaattaaatcctttcagctgaataaatcaataccagagattgat
aaaagtttatataataagttattagactatgattggcctggaaatataagagagcttgaa
aattatattgagaatatagtaaatttggatggacgatcatcttttaatttatgggaattt
gaagataatcaaagttttgagacagataaaacatatgatagaaaaatattaaaagatggc
tttttaaataaagagatatgggaagatgatcagactaatggtttacttaagaatgttaat
actgaaaagactgagtatatggtaaatactttaaatctagaagaactagaaatgaaggca
attcatgaagctgtaagaataaatgatcataatatgacaaaagctgctaaaactttaggt
ataagtagaaacactctatacctaaaattaaaaaaacataaataa
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