Clostridium beijerinckii NCIMB 8052: Cbei_2779
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Entry
Cbei_2779 CDS
T00547
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cbei_2779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbe03019
]
Cbei_2779
03009 Ribosome biogenesis [BR:
cbe03009
]
Cbei_2779
Enzymes [BR:
cbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Cbei_2779
Messenger RNA biogenesis [BR:
cbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cbei_2779
Ribosome biogenesis [BR:
cbe03009
]
Prokaryotic type
rRNA helicases
Cbei_2779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Cas3-like_C_2
UvrD-helicase
mRNA_decap_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABR34930
UniProt:
A6LX50
LinkDB
All DBs
Position
complement(3231015..3232460)
Genome browser
AA seq
481 aa
AA seq
DB search
MIKANFNDYKLSSELLKAISMLNFKELTKVQEQVIPIALEEKDIVVKSKTGSGKTASYAI
PICQLVDWEENKPQALVITPTRELAIQVKEDFFNIGRFKRIKAAAIYGKSSFYDQEKELK
QKTHIVVGTPGRIIDHIEKGTFDLSKIKYLIIDEADEMLNMGFVEQIETIIKSLSKERVT
MLLSATMPKDIETLCNKYMKDPIHIEIEEQNKAADNICQERYNVNELNKIDLLRDITILE
NPDSCMIFCNTKQKVDEVYKELAKLQYDCRKIHGGMEQSDRLRVMNNFKLGYFRYLIATD
VAARGIDIDNITHVINYDIPEDKESYVHRIGRTGRAGKMGRAITFVTQNESKFLNDIHEY
IGKEIPLKERPKVETVNNLKEEFALKMNTRPEIKETKGAKLSKEIMKLHINAGKKTKMRA
VDIVGTLCNIEGMTKDDIGIINIFDISTFVEILNNKGEWVFQQLQKTPIKGRLRTVSKVD
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagcaaattttaatgattataagttaagcagtgagttattaaaagcaattagc
atgttaaacttcaaggagttaacaaaagttcaggaacaggttataccgattgcgttagaa
gaaaaggatatagtagtaaagtctaaaactggaagtggtaagactgcatcatatgctatt
cctatttgccaattagtggattgggaagaaaataaacctcaagcattagtgattacacca
acaagagaacttgctatccaagtcaaagaggatttttttaatataggtagatttaaaaga
attaaagcagctgcaatttatgggaagtcatctttctatgatcaagaaaaggaacttaag
caaaagacacatatagtagttgggacacctggtcgtattatagatcatatagaaaaaggt
acatttgatctatcaaagataaagtatcttataatagatgaagctgatgaaatgcttaat
atgggatttgtagagcaaatagaaacaataataaaaagcttatcaaaagaacgtgtgacc
atgttattgtcagccacaatgccaaaagacatagagactttatgtaataaatatatgaaa
gatcctatacatattgaaatagaggagcaaaacaaagctgcagataatatatgtcaagaa
agatataacgtaaatgaattgaataaaatagatctcttaagagatataactatattagaa
aatccagatagttgtatgatattctgcaatacaaaacaaaaggtagatgaagtttataaa
gaattggcaaagctccagtatgattgcagaaaaatacatggtggaatggaacaaagtgat
agattaagagtaatgaataattttaagctgggttattttagatatttaatagccacagat
gttgcagctagagggatagatatagataatatcacccatgtaattaattatgatatacca
gaagacaaggaaagttatgtacataggataggaagaactggacgtgcaggcaagatgggt
agagcaattacttttgtaacacaaaatgaaagtaagtttttaaatgatatacatgaatat
attggtaaagaaattcctttgaaggaaagacctaaagtggaaactgtaaataatcttaaa
gaagaatttgctttgaaaatgaacacaagacctgaaattaaagaaacaaaaggtgcgaag
ctaagtaaagagattatgaaattacatattaatgcaggtaagaaaacaaagatgagggcg
gtagatattgtaggcacgctttgtaatattgaaggcatgacaaaagacgatataggaata
atcaatatatttgatatatctacctttgtagaaatattaaataataaaggagagtgggtg
ttccagcagttacaaaaaacacctatcaaaggcaggcttcgtaccgtaagtaaagttgat
atataa
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