KEGG   Clostridium beijerinckii NCIMB 8052: Cbei_4249
Entry
Cbei_4249         CDS       T00547                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cbe  Clostridium beijerinckii NCIMB 8052
Pathway
cbe02020  Two-component system
cbe02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cbe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Cbei_4249
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Cbei_4249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbe03021]
    Cbei_4249
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cbe02035]
    Cbei_4249
Transcription machinery [BR:cbe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Cbei_4249
Bacterial motility proteins [BR:cbe02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Cbei_4249
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF UPF0122 HTH_3
Other DBs
NCBI-ProteinID: ABR36359
UniProt: A6M179
LinkDB
Position
complement(4907965..4908693)
AA seq 242 aa
MHALKDVDGKEQIIQEYIPLVKYIASRVMFGKNKYMEYEDLVSYGMVGLMDALNKFDDTK
GMKFSSYASIRIKGAMIDELRRNRPISKGAMDKLNKYNKAVDTLQLELLREPTNDEIAKY
LGISMSEVAEIENYINYISMVSLENVIFSDDEDVNLIGIIEDKNSPSPDAYLQDKEQLEI
LTKAIDLLKEKDRIVLNLYYYEGLTLKEIGTVLSVSESRVCQLHSRAISSLRECMRKLHY
ID
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcacgcgttaaaagacgttgatggaaaagagcagataatacaagaatatatcccgtta
gtaaagtatattgcctcaagggttatgtttggaaagaacaaatatatggaatatgaggac
ttagttagttacggtatggttggacttatggatgcattaaataagtttgacgatacgaag
ggaatgaaattttcatcatatgcgtctataagaataaaaggtgctatgatagatgaactg
aggagaaatagaccaatatctaaaggggcaatggacaaattaaataaatataataaagcg
gtagatacattacagctagaactattaagggaacccacaaatgatgagattgcaaaatat
cttggtatatctatgagtgaagtagcagaaattgaaaattacataaattatatttcaatg
gtatcactggaaaatgtaattttttcagatgatgaagatgtaaaccttattggaattata
gaagataaaaatagtccaagtcccgatgcttacttacaagataaagagcaactagagatt
ttaacaaaggcaattgatctccttaaggaaaaagatagaatagtattaaatctttattat
tatgagggattaactttaaaagagataggaacggtattaagcgtttctgaatctagagtt
tgccaattacatagtagagctattagtagcttgagagaatgcatgagaaaattgcattat
attgattaa

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