Clostridium beijerinckii NCIMB 8052: Cbei_4321
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Entry
Cbei_4321 CDS
T00547
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03410
Base excision repair
cbe03430
Mismatch repair
cbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cbei_4321
03430 Mismatch repair
Cbei_4321
03440 Homologous recombination
Cbei_4321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbe03400
]
Cbei_4321
DNA repair and recombination proteins [BR:
cbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cbei_4321
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cbei_4321
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cbei_4321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ABR36431
UniProt:
A6M1F1
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All DBs
Position
complement(4978536..4980302)
Genome browser
AA seq
588 aa
AA seq
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MAERWFIKNIKADYKYISKKYALSELVSRLIVNRNIISDEMIRSYINPDFDKFHEAREMK
DLEKSVDILREKIKAQNKIRIVGDYDVDGVISIYILYSALKRCNANVDYEIPDRIKDGYG
INMNIIKQAKEDGVDTILTCDNGISAIDQIKYAKELGITVIVTDHHDIPFVEKENNVREF
ISLSADAVVNPKQSECNYKFKQLCGAGVAFKLVEILYETFNIDKKECYKFIEFLAIATVC
DVVDLVDENRIFVKKGLELINSTTNLGLQELIRECELTEKTLSVYHLGFIIGPCINASGR
LDSAKRGLKLLLSDDEEEAVRLAKELVKLNEDRKDMTMNGVEAAVEIIEKSGMINDKVFV
IYIPDIHESLAGIIAGRIKEKYNVPTLVITKAEHGVKGSGRSIEEYNMFEELIKCKDLLE
KFGGHPMAAGFSLKEENIDEFRRRLNENTILKDEDLLRKVTIDSVLPLDAINYDVINDLE
RLEPFGKSNSKPLFAEKNINLLKATILGKNRNVLKLKLKTRMNKALDAIYFGDIEKFEEE
VSSKYGNEELQKLYNGEYNHVNLDLVFYPNVNEYNGNTTIQIVIQNYR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagatggtttataaaaaatataaaagctgattataaatacatatctaaaaaa
tatgcactttcagaattggttagtaggcttatagtaaacaggaatattataagcgatgaa
atgataagaagttatattaacccggattttgataaatttcatgaggctagagaaatgaaa
gatttagaaaaatcggttgatatactgcgtgagaaaataaaagctcagaataagatacga
attgttggagattacgatgttgatggtgtaataagtatttatattttatactcagcttta
aaaaggtgcaatgcaaatgtagattatgaaattccagatagaataaaagatggatatgga
attaatatgaatattataaagcaggcaaaagaagatggggttgataccatactgacttgc
gataatggtatatccgctatagaccaaataaaatacgcaaaagaattaggaattaccgta
atagttacagatcatcatgatataccatttgttgagaaagaaaataacgtcagagaattt
ataagtttaagtgctgatgctgtagtaaatccaaagcaaagtgaatgcaattataaattt
aaacaattgtgtggagcgggtgtagcatttaagcttgtagaaattctttatgagactttt
aatatagataaaaaagaatgctacaaattcatagaatttttggcaatagcgacagtttgc
gatgttgtagatttagttgatgagaataggatatttgttaaaaagggattagaacttatt
aacagtacaactaacttaggactacaagaattaataagagaatgcgaattaacagaaaaa
actttatcggtatatcatcttggatttattatagggccatgcataaatgcttcaggaagg
ctagattcggctaaaagaggattgaaattattgctctcagatgatgaagaggaagcagta
aggctcgcaaaagaattagttaaattaaatgaagatagaaaagatatgaccatgaatggc
gtcgaggctgctgttgaaatcatagagaaaagtggaatgataaatgataaagtatttgtt
atctatattcctgatatacatgaaagtttagcaggtataatagcaggaagaataaaagaa
aaatataatgttccaactttggttataacaaaagcagaacatggtgtgaagggttcagga
agatcaatagaagaatacaatatgtttgaagaacttattaagtgtaaggatctgcttgaa
aagtttggcgggcaccctatggctgcaggtttttcattaaaagaagaaaatatagatgaa
tttaggcgaagattaaatgaaaatacaattttaaaagacgaggatttattgagaaaagtt
actatagactcggttttgccgcttgatgctataaactatgatgtgataaatgatttagaa
agattagagccttttggtaaatcaaactctaaaccattgtttgctgagaaaaatattaat
ttattaaaggcaacaatacttgggaagaataggaatgtgctaaaattaaaactcaagacc
aggatgaataaagctctggatgccatttattttggtgatattgaaaagtttgaagaagaa
gttagcagtaaatatggaaatgaagaattgcaaaaactctataatggagaatataatcat
gtgaaccttgatttagtattttatccaaatgttaatgaatataatggtaatactactata
caaatagtaatacaaaattataggtaa
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