Clostridium beijerinckii NCIMB 14988: LF65_00170
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Entry
LF65_00170 CDS
T04773
Name
(GenBank) RNA polymerase sigma-H factor
KO
K27000
RNA polymerase sigma-H factor
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbei03021
]
LF65_00170
Transcription machinery [BR:
cbei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LF65_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_16
DUF1676
Rad10
HTH_30
HTH_23
HTH_38
MbeB_N
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AJG96849
UniProt:
A0A0B5Q3U4
LinkDB
All DBs
Position
177450..178097
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AA seq
215 aa
AA seq
DB search
MQKRVENKQLKGFLDFKDKSDEEIVAKAKSGNSRAQEYLISKYENFVKSKAKSYFLIGAD
KEDIYQEGMIGLYKAIRDFNAEKSTSFKAFAEICVIRQIITAIKTATRQKHIPLNTYVSL
NKPIYEEESERTLLDVLAGLKISDPEELMISKEQMDYIEKKISKVLSDLELEVLTSYLDG
KSYQEIASDLERHSKSIDNALQRVKRKLEKCLDLK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagagttgagaataagcagttgaaaggttttttagatttcaaagataaatca
gacgaagaaattgttgcgaaagctaagagtggtaatagtagggcgcaagaatatttaatt
tcaaaatatgagaactttgtgaagtcgaaggctaaatcatattttttaattggagccgac
aaggaagacatttatcaagaagggatgataggtttatataaggctatcagagattttaat
gcagaaaaatcaacatcatttaaagcctttgcagaaatatgtgtaatcagacaaataata
actgcaataaaaacagctactaggcagaaacatattccgttaaatacttatgtctcttta
aataagccaatatatgaagaggaatcagagagaactctccttgatgttttggcaggattg
aaaatttcagatcctgaagagctaatgattagtaaggaacaaatggattatatcgagaaa
aagatttcgaaagtgttatcagatttggaattagaagttcttacttcatacctagatgga
aaatcttatcaggagattgcaagtgatttagaacgacattcgaagtcgatagataatgca
ttacaaagagtaaagagaaaattagaaaaatgcttagatttaaagtga
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