Clostridium beijerinckii NCIMB 14988: LF65_00927
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Entry
LF65_00927 CDS
T04773
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LF65_00927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_00927
DNA repair and recombination proteins [BR:
cbei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF65_00927
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LF65_00927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
KCTD11_21_C
Motif
Other DBs
NCBI-ProteinID:
AJG97550
UniProt:
A0A0B5Q9E3
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Position
1004522..1005271
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AA seq
249 aa
AA seq
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MVDLSIVETKAVIIKTQDFKENDKLVWFYTEKLGKITAIVRGAKKSKSKFLALTLPLCYG
EYMVYKGKSLYTLQEGKIIQSFQGLLNDLHKLTYSSYLCELIDIACTDNEINMELFKTLI
TTLYLLNTDALDYELLIRAFELRLLKTTGYNLTLNNCSVCRKKISSSNYISLSHYGGICD
ECPKEHGVFISKGAYNALRFLMNMDIDKLYRLNLNHEIKSEIEKVITFLVSNSYAKKPKS
LEMLKFIKE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggttgacctgtcaatagttgaaacaaaagctgtaattataaaaacgcaagattttaaa
gagaatgacaaactagtttggttttatactgagaagttaggtaaaattacagctatagtt
agaggcgctaaaaaaagtaaaagtaagttcttagcattgacattgccattatgttatgga
gaatatatggtatataaaggtaagagcttgtacactcttcaagaaggaaaaataattcaa
tcttttcaaggacttttaaatgatttacataaacttacatattcctcatacttatgcgaa
ttaatagatattgcttgtactgataatgaaattaatatggaactttttaagacattgatt
acaacattatacctactgaatacagatgccttagattacgaactactaataagagcattt
gaattaagattattaaaaacaactggatataatctaacattgaataattgtagtgtatgt
agaaaaaagatatcttcatctaattatataagtttatcccactatggaggtatatgtgat
gaatgtcccaaagaacatggagtatttatttcaaaaggtgcatataatgccttgaggttt
ttgatgaatatggatatagataaattatatagactaaatttaaatcatgaaataaaaagt
gagattgaaaaagtaattacttttttagtatcgaatagctatgctaaaaagcctaaaagt
ttggagatgttaaaatttattaaggagtga
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