Clostridium beijerinckii NCIMB 14988: LF65_01265
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Entry
LF65_01265 CDS
T04773
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LF65_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbei03021
]
LF65_01265
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_01265
Enzymes [BR:
cbei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LF65_01265
Transcription machinery [BR:
cbei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LF65_01265
DNA repair and recombination proteins [BR:
cbei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LF65_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Cupredoxin_1
Motif
Other DBs
NCBI-ProteinID:
AJG97878
UniProt:
A0A0B5QM65
LinkDB
All DBs
Position
1394354..1394572
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AA seq
72 aa
AA seq
DB search
MNNSMISPSVVDLLEKIHDRYSLVILTSKRARQIIEGAEPQISIKSNKPLTIAINEVDQD
AVEFEILEEGLK
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactctatgattagtccatcagtagtagacttattagaaaagatacatgacaga
tattctttagtaattttaacatcaaaaagggctagacaaataatagaaggtgcagaacct
cagatttcaataaaatcaaataaacctttaacaattgcaataaatgaagtggatcaagat
gcagttgaatttgaaattttagaagaaggtcttaaataa
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