Clostridium beijerinckii NCIMB 14988: LF65_02514
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Entry
LF65_02514 CDS
T04773
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03420
Nucleotide excision repair
cbei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF65_02514
03430 Mismatch repair
LF65_02514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_02514
Enzymes [BR:
cbei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF65_02514
DNA repair and recombination proteins [BR:
cbei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF65_02514
MMR (mismatch excision repair)
Other MMR factors
LF65_02514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
DEAD
ResIII
SLFN-g3_helicase
DUF6809
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJG99096
UniProt:
A0A0B5QLI9
LinkDB
All DBs
Position
2729432..2731699
Genome browser
AA seq
755 aa
AA seq
DB search
MDTILNEERDVLLQKKDIIKQELKEKKQKFEEVGEKIKTLNKQVKSFSEEKQANERIFSY
LSQDIEKYEESLIEPYFGRVDFRENMGFTESIYIGKKGISNSKDGEEIVVDWRAPVADLY
YSGTGGDAYYKAPQGIVEGKLELKRKFLYKNSDIEKVFDEGINNIIINEEEGQNLVDEFL
KINLEESSGKKLKEVVATIQKEQNEIIRWPKNLPIIVQGSAGSGKTTIALHRLAYLIYRY
KESMSGDEILVLAPNKLFLSYISDILPSLGAEEVNQSTFEEMVLSKLKLKGKVYNKDEKL
LRIIEENDENLKKLIVNSSKVKGTMLFKTMLDRYIALMEKDAIHIEDIKVGNEILFHKKE
IMRLYIKDLKAYPINKRKKEIKRYLNLKIKERIESLLIEIDNEWEKKIREIRRENEDSPE
RRKLLISIYEERDKIKENVKSNGKKEFNNYFKDWKDINSRDIYYNFYNDELFETATGSKI
PKVLADYMKEEFNSNFEKNIIDEDDLPALAYIRILLEGIDEEEKFKYIIVDEAQDYSPFQ
VYLVNSFAKGNALTLVGDLAQGIYYYKGLKTWEDITEQVFDGNATYIQLTQSYRSTVEII
DFAKKTLQSQNLGLKDAKPVLRHGEKPKIVKISSGDEYISAIEKIINEVQNHGKRTVAII
TKNMLQGEEIYKLLKGKSKYNFELILGKEKEIAEDLIIIPSYLTKGLEFDCTIILNPSED
NYKENILDERLLYVSLTRALHLEYIIIKDEATNLI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggatacaattttgaacgaagaaagagacgtattactgcagaagaaagatataataaaa
caagaattaaaggaaaagaaacaaaaatttgaagaagtaggggaaaaaattaagacttta
aataaacaagtaaaaagctttagtgaagaaaagcaagctaatgaaagaatatttagttat
ttatctcaagatattgagaaatatgaagagtctttaatagagccttattttggtagagta
gactttagagaaaatatggggtttactgaaagtatatatattgggaaaaaaggtataagt
aacagcaaagatggagaagaaattgtcgttgattggagagcgccagttgcggatctttat
tacagcggaactggtggagatgcgtattacaaagcaccacaaggaatagttgaaggaaag
ctagaactaaaaagaaaatttttatataagaatagtgatatagaaaaggtatttgatgaa
ggaataaataacatcattataaatgaagaagaaggacaaaatttagttgatgagttttta
aagataaatcttgaagaaagcagtgggaaaaagctaaaagaagttgttgcaacaattcag
aaagaacaaaatgaaataataagatggcctaaaaatctgcctataatagtacaggggtca
gcaggttcaggtaagacaacaatagcgttacacaggttagcttatctcatttatagatat
aaagaaagcatgagtggagatgaaattttagttttagctcctaataaactatttctaagt
tacatttcagatattttacctagcctaggagcggaagaagtaaatcaaagtacttttgag
gaaatggtattatcaaagttaaaactaaaaggaaaagtttataataaggatgaaaaatta
ttaaggataatagaagaaaatgatgagaatctaaaaaagcttattgtaaattcaagcaaa
gttaaaggaaccatgctatttaaaacaatgcttgatagatatatagcattaatggaaaaa
gatgcgattcatattgaagatattaaagttggaaatgagatattatttcataaaaaagaa
ataatgagattatatataaaagatctaaaagcttatcccatcaacaaaaggaaaaaggag
ataaaaagatatttaaatttaaaaataaaagaaagaatagaaagcctattaatagaaata
gataatgaatgggaaaagaaaataagagaaataagaagagaaaatgaagattcgccggaa
agaagaaaattacttataagtatatatgaagagagagataaaataaaggaaaatgtaaaa
agtaacggtaaaaaggaatttaataattactttaaagattggaaggatataaattctaga
gatatctattataatttttataatgatgagttatttgaaacggcaactggaagtaagatt
cctaaggtattggcagattatatgaaggaagaatttaatagtaattttgaaaagaatata
atcgatgaagatgacttgccagctcttgcatatataagaattttacttgaaggaattgat
gaggaagaaaaatttaaatatattatagtggatgaagctcaagattatagcccattccaa
gtatacttagttaatagttttgctaaaggcaatgcgttaactttagtaggggatttagct
caaggtatttattattataaaggattaaagacatgggaagacataacagagcaagtcttt
gatggaaatgcaacatatattcaattgacgcaaagctatagatcaacagttgaaataatt
gattttgcaaagaaaacattacaatctcaaaacttaggacttaaggatgctaaaccagtt
ttaagacatggtgaaaagcctaaaatagtaaagatttctagtggagatgagtatatttca
gctatagagaaaatcattaatgaagtgcagaaccacggaaaaagaacagtagcaataatt
acaaaaaatatgttacaaggtgaagaaatatacaaacttctaaaaggaaagagcaaatat
aattttgaactaatattaggcaaggaaaaagaaatagcagaagatctaataataatccca
tcatatttaacaaaaggattggagtttgattgtacaataatattgaatccaagtgaagac
aactataaagaaaacattttagatgaaaggttattatatgtttctttaactagggcatta
catttagaatatataataataaaagatgaagctacaaatttaatttag
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